CI01000154_01303717_01309218


Basic Information

Item Value
gene id CI01000154_01303717_01309218
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000154
NCBI id null
chromosome length 1600967
location 1303439 ~ 1309285 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000154_01303717_01309218.mRNA
ATTTTCTCCTCTTTAGCTGGATTGATGTAATTATAGGTGGAGAATTTTTTCAATCTAAATATTAAGGATGAATGTGCTTTTTCTTTCCATACTTACTGTTTTATGCAGGTTTGCTTCATGTGCAGAATGGTGTTATCAGACCCAAGTCACTTGCAATAGCACGTGCGTAGGACCGGATGAATGGGCAACCATTTACAAAAACTGTGGAAATGAACATCAGTCACCCATTAACATTGTAACAAAGAATGCTTCCACAGTCAGTCATCTGACCGAAATGGTGTTTACAGGCTATGAAGAGATGATCAATAGAGTCATTATAAACAATGGACACACAGTGCAAATGAATCTGCCAAACAAAGCAACAATTAAAGAGGCCAATTTAGAAGACACTTACATAGCTCAGCAGCTTCACCTGCACTGGGGCAAGAATGGTGGACCTGGATCAGAACATACTATAGATGGAGAGAAATACCCTATGGAGCTGCATATTGTACATATAAAAGAAAAGTACAGCTCTGTGGAACAAGCCATCAATGACTCTTCTGGAGTGGCTGTTCTTGGATTTTTTTATGAGGAATCAGAAAATGCCAATAAAAATTATGAAGCCATCATAAATTCTCTGGAAAATATTACACACCCTGGCACCAATGTTACACTTGGAGAAGTATCATTAGACATGCTTATTCCCCCCCATGATAAATTGGCGAAGTACTATCGCTACCAGGGGTCCCTCACCACACCAGCCTGCTCTGAAGCAGTGGTCTGGACAATATTTGAGGAAAGAATACCACTCAGCAAAGAACAGCTTTCTGCATTTTCAAACTTGACGTTTTCTGATGGGACTGCCATGGTAAACACATACCGACCCGTTCAGCTGCGGAATGATCGTGAGGTGTTTTATTCTAGGAGTTATGTTTTCTGTGTTAGCACTGCCTTCTTGATCAGCTCTGTTTTCACATCACTCTATGCTCTCATGTTGTGATTTATGGGTATTGCTCGAAGCAAGTTATTTATCATTTCTTAATAATTCAAGACCAATCAAACTTTACTGTTGTTCAGCCTGTGGCTTCAACAGTGTTATTATCTAACATAAAATGAACCTGAAGCACATCCTATGTCAGAGGCCTTCTCACATGTATCTAATGAACATTATTTATACAAAAGTCATTGAACTGATATTGTTGTGAAAAGCGTTGTAAAAGTACAATTTTTAGCTTGGTAGGCCTAATTGTTCAGTCCCAATTGTAAAACAATAATAAA

Function

NR:

description
LOC407683 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000154_01303717_01309218.mRNA True 1260 mRNA 0.39 8 1303439 1309285

Neighbor

gene id symbol gene type direction distance location
CI01000154_01267269_01269079 NA coding downstream 34360 1266175 ~ 1269079 (-)
CI01000154_01213994_01216752 TMEM160 coding downstream 86687 1213084 ~ 1216752 (-)
CI01000154_00982864_00992761 AP2S1 coding downstream 309911 981863 ~ 993528 (-)
CI01000154_00864988_00870719 PPM1NA coding downstream 432095 864968 ~ 871344 (-)
CI01000154_00847380_00859545 NA coding downstream 441807 846782 ~ 861632 (-)
CI01000154_01316706_01317237 NA coding upstream 7396 1316681 ~ 1317421 (-)
CI01000154_01338824_01343731 NA coding upstream 29451 1338736 ~ 1345247 (-)
CI01000154_01350180_01372314 C2CD3 coding upstream 40668 1349953 ~ 1372314 (-)
CI01000154_01374595_01375245 MED29 coding upstream 65176 1374461 ~ 1376830 (-)
CI01000154_01383482_01395024 NA coding upstream 73502 1382787 ~ 1395540 (-)
G362317 NA non-coding downstream 238 1302883 ~ 1303201 (-)
G362257 NA non-coding downstream 13716 1289017 ~ 1289723 (-)
G362271 NA non-coding downstream 25731 1276333 ~ 1277708 (-)
G362250 NA non-coding downstream 55275 1247256 ~ 1248164 (-)
G362287 NA non-coding downstream 133355 1165454 ~ 1170084 (-)
G362324 NA non-coding upstream 12387 1321672 ~ 1321978 (-)
G362267 NA non-coding upstream 64392 1373677 ~ 1373973 (-)
G362266 NA non-coding upstream 133296 1442581 ~ 1490929 (-)
G362252 NA non-coding upstream 190602 1499887 ~ 1502897 (-)
CI01000154_01524327_01555571 NA other upstream 222432 1524267 ~ 1555647 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location