CI01000154_01316706_01317237


Basic Information

Item Value
gene id CI01000154_01316706_01317237
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000154
NCBI id null
chromosome length 1600967
location 1316681 ~ 1317421 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000154_01316706_01317237.mRNA
AGTTGGAGACGTTTCAGGTAAAACTGATCCATTTCCTCCAAGAGGATTAGTCTCAGGCAGATTATCTTGTTTACCTCTCTTAATACTAAAGCTATAGGGAGCATATGGGTGTTTGATAACCACCTGTCTGCCTACTGAGGGGACATCAGACGGGCAGTCACAGGCATAGAGGAAGAAGACTGGAATGATTGGGCTGGATGTCTATCTATATCCAGATGGTCTTAGGGTTGCTACACCAGAAGATATAGAGAGGTGGGAATCAGAGAGGGAAATGTATGAGCCGGATGTGCGCCTCTTTGTGGCTCTGTTCTCATACAACCCTGCATTGATGTCACCAAACCCTGAAACAATGGAGGAGGAACTGCCTTTTGAACAAGGACAGATCATTAAAGTATATGGAGATAAAGATGCTGACGGTTTCTACAGTGGGGAGACTGGTGGTCGCTTTGGTTTTGTGCCAAGCAACATGGTATCTGAGATTCCTGTGGAAGACGGAGAGCTTAAACTTCATCTGTTCCAGCAGGGGTTTTTACCAGAGGAGACGCCTTCTATAGGCAAGTATTTTTTGTCTGTATTTTTTATTTGATAAAACTATCCACGTAATTATTAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description
K17591 RIMBP2; RIMS-binding protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000154_01316706_01317237.mRNA True 611 mRNA 0.44 2 1316681 1317421

Neighbor

gene id symbol gene type direction distance location
CI01000154_01303717_01309218 NA coding downstream 7396 1303439 ~ 1309285 (-)
CI01000154_01267269_01269079 NA coding downstream 47602 1266175 ~ 1269079 (-)
CI01000154_01213994_01216752 TMEM160 coding downstream 99929 1213084 ~ 1216752 (-)
CI01000154_00982864_00992761 AP2S1 coding downstream 323153 981863 ~ 993528 (-)
CI01000154_00864988_00870719 PPM1NA coding downstream 445337 864968 ~ 871344 (-)
CI01000154_01338824_01343731 NA coding upstream 21315 1338736 ~ 1345247 (-)
CI01000154_01350180_01372314 C2CD3 coding upstream 32532 1349953 ~ 1372314 (-)
CI01000154_01374595_01375245 MED29 coding upstream 57040 1374461 ~ 1376830 (-)
CI01000154_01383482_01395024 NA coding upstream 65366 1382787 ~ 1395540 (-)
CI01000154_01411672_01413992 NA coding upstream 93561 1410982 ~ 1415458 (-)
G362317 NA non-coding downstream 13480 1302883 ~ 1303201 (-)
G362257 NA non-coding downstream 26958 1289017 ~ 1289723 (-)
G362271 NA non-coding downstream 38973 1276333 ~ 1277708 (-)
G362250 NA non-coding downstream 68517 1247256 ~ 1248164 (-)
G362287 NA non-coding downstream 146597 1165454 ~ 1170084 (-)
G362324 NA non-coding upstream 4251 1321672 ~ 1321978 (-)
G362267 NA non-coding upstream 56256 1373677 ~ 1373973 (-)
G362266 NA non-coding upstream 125160 1442581 ~ 1490929 (-)
G362252 NA non-coding upstream 182466 1499887 ~ 1502897 (-)
CI01000154_01524327_01555571 NA other upstream 214296 1524267 ~ 1555647 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_008380 si:ch211-105f12.2 coding NC_007126.7 CM002899.2 15375607 ~ 15381879 (+)