G362287


Basic Information

Item Value
gene id G362287
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000154
NCBI id null
chromosome length 1600967
location 1165454 ~ 1170084 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU413133
TTTGCTTATGACTTGTGGGTAAAGAAAAAACATTTTTGGGGCCTTTGCACGTATGAAGTCTCTCAATTCAGTGTTGTCTATATATGGCTATGACCTTGAATTAATCATTTTTCAAGTGATTCTTTTTAGATGTTTAAAGACAATAATTTTTTTTACAAAAATGAAAATTCTACACTGTTCATTTTCAGTATGATCCCTCTGTCAGTCAGGGACCTGTGGACTGTGCTTTCTTATGTATCGTTTCCTTAGGAATGTCTTATTTGGCAACTTCCGCCATACACCTTTTGTCCATACTTGCATATTCCTGTGTGGTTTCTTATATTCATTGGGACTATTGGGAAAAAATTATAGGTGGGCTCATCTCCCGGGGGTCAAACAGGACCTTAGTACGCACCCCTCATCAAAGAGTCTCCTATCCAATGATGGCTCTGTATATTCCCAATGGTTCAGACCTCAATGTTGGCCCCTCTGTGTAAGTTGCATGAAGTCCTTCATATGTTCAGTATGGCTTTGACTGCTTGTCCAGAGAGAGGAAGACACACTAACAAATTAACAGAGAAAAGTCTGGAGAGGATTCTGGGAAGACTGTTTAACAAACCTCAAGTTCCTCTCTCAACGTTGTGCCCTGTCCTTTACAATCTCTTCCACCTCTCCTTTACATTTTTTTTTCTGTCTTTCTCCCTCAATCCTCGTCTGTCCCTGCCGCCCCCCTCAGTCCGTTCATACAGAAGGGCAGAGTTGGAGGAAAGGTGGGTTCGGCTGGAGAAAAGCCACTAAAAGGAGGCAGAGATGCGATCCTTTGCAGGTGAGGAAAGAAAGTGGGGGTTTTGGCCACGTGGTCTGAACGGTGCCCATCAGAGTGAGCTGTAGGCATCTCAGGTGGGGCGTAGCGAATGGTGCTGGGAGCGTAAAGACTCTGAGGCCCCTGTGGGCCAAGAGCCAGGGGGTGAAAGAGCACACGTCCCGCAGCCCCACTCGCAGTCAGTCTCTGCAGTAGCTCGAAGTCTGGAGCGCGCCCTCCGTGGATGGACCTGTCATCTCTGGGCAGGGACGAGGCTGAGATGGGTGGAGACAGAGTTGGGGATGGTGGGTTGAACAGACCCTTGGGTGGAGCTTCTGTCGGGTCTTAATATTCGACCCGGAACTGGTCACCACGCTCTTAAGATGCTGGATCACAGCGCGGCCGTTGTGGATCTTACCTGCTCCATTGGCCCCATTGCCTTGTTTCAGTGCCCCCTCTTCGCTCTTCACCCGTTTGCTGGTGGGGTTGTGGTCCCACACGCTCTCTCTCTCATCGTCCTCTTCCACCTCGCTGTCGCTGGCTTGGTCCGAGGAGGTACATGGGCTGTCATCTCTCTGACGGAACACCTCAATCCGCCTCCTCGCCTCGTGAGGGCCACTTTCAGCGTCAGACTGGTGCGATCTCTTCCTGGTGCCCTCTGATTGGCTGGCAGCAGTGTGTGAAAAGGGTTCCTTCCCTTTGTGGTCCGTCTCAGACCTGCCTTTCAATGGCTGTGTCGCCGTGGAGCCTTGTGCCTTTGGAGAGGTGTCACGTGGGGAGGAGCTTGCTTGAAGCCGCTCTGCCCTCAGGCTTTCTGGGAGTTGTAATAAGTCCAGAGGCATGTCTGGCAGCTCTGGTCGACTGAGCACATAGTTGACCCAGATGACGTTACGCTCATGGGGCGCTTTGTGGTTAATGGACACGGTGGCACAGGACTGAATCCACAGATACCCTCCTCTCCTCTGCAGCCACCTATAATACCC
>TU413132
TTTGCTTATGACTTGTGGGTAAAGAAAAAACATTTTTGGGGCCTTTGCACGTATGAAGTCTCTCAATTCAGTGTTGTCTATATATGGCTATGACCTTGAATTAATCATTTTTCAAGTGATTCTTTTTAGATGTTTAAAGACAATAATTTTTTTTACAAAAATGAAAATTCTACACTGTTCATTTTCAGTATGATCCCTCTGTCAGTCAGGGACCTGTGGACTGTGCTTTCTTATGTATCGTTTCCTTAGGAATGTCTTATTTGGCAACTTCCGCCATACACCTTTTGTCCATACTTGCATATTCCTGTGTGGTTTCTTATATTCATTGGGACTATTGGGAAAAAATTATAGGTGGGCTCATCTCCCGGGGGTCAAACAGGACCTTAGTACGCACCCCTCATCAAAGAGTCTCCTATCCAATGATGGCTCTGTATATTCCCAATGGTTCAGACCTCAATGTTGGCCCCTCTGTGTAAGTTGCATGAAGTCCTTCATATGTTCAGTATGGCTTTGACTGCTTGTCCAGAGAGAGGAAGACACACTAACAAATTAACAGAGAAAAGTCTGGAGAGGATTCTGGGAAGACTGTTTAACAAACCTCAAGTTCCTCTCTCAACGTTGTGCCCTGTCCTTTACAATCTCTTCCACCTCTCCTTTACATTTTTTTTTCTGTCTTTCTCCCTCAATCCTCGTCTGTCCCTGCCGCCCCCCTCAGTCCGTTCATACAGAAGGGCAGAGTTGGAGGAAAGGTGGGTTCGGCTGGAGAAAAGCCACTAAAAGGAGGCAGAGATGCGATCCTTTGCAGGTGAGGAAAGAAAGTGGGGGTTTTGGCCACGTGGTCTGAACGGTGCCCATCAGAGTGAGCTGTAGGCATCTCAGGTGGGGCGTAGCGAATGGTGCTGGGAGCGTAAAGACTCTGAGGCCCCTGTGGGCCAAGAGCCAGGGGGTGAAAGAGCACACGTCCCGCAGCCCCACTCGCAGTCAGTCTCTGCAGTAGCTCGAAGTCTGGAGCGCGCCCTCCGTGGATGGACCTGTCATCTCTGGGCAGGGACGAGGCTGAGATGGGTGGAGACAGAGTTGGGGATGGTGGGTTGAACAGACCCTTGGGTGGAGCTTCTGTCGGGTCTTAATATTCGACCCGGAACTGGTCACCACGCTCTTAAGATGCTGGATCACAGCGCGGCCGTTGTGGATCTTACCTGCTCCATTGGCCCCATTGCCTTGTTTCAGTGCCCCCTCTTCGCTCTTCACCCGTTTGCTGGTGGGGTTGTGGTCCCACACGCTCTCTCTCTCATCGTCCTCTTCCACCTCGCTGTCGCTGGCTTGGTCCGAGGAGGTACATGGGCTGTCATCTCTCTGACGGAACACCTCAATCCGCCTCCTCGCCTCGTGAGGGCCACTTTCAGCGTCAGACTGGTGCGATCTCTTCCTGGTGCCCTCTGATTGGCTGGCAGCAGTGTGTGAAAAGGGTTCCTTCCCTTTGTGGTCCGTCTCAGACCTGCCTTTCAATGGCTGTGTCGCCGTGGAGCCTTGTGCCTTTGGAGAGGTGTCACGTGGGGAGGAGCTTGCTTGAAGCCGCTCTGCCCTCAGGCTTTCTGGGAGTTGTAATAAGTCCAGAGGCATGTCTGGCAGCTCTGGTCGACTGAAAATACAGATAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU413133 False 1764 lncRNA 0.51 4 1165454 1170084
TU413132 True 1661 lncRNA 0.50 3 1168215 1170084

Neighbor

gene id symbol gene type direction distance location
CI01000154_00982864_00992761 AP2S1 coding downstream 171926 981863 ~ 993528 (-)
CI01000154_00864988_00870719 PPM1NA coding downstream 294110 864968 ~ 871344 (-)
CI01000154_00847380_00859545 NA coding downstream 303822 846782 ~ 861632 (-)
CI01000154_00797516_00828865 PTGIR coding downstream 336589 797401 ~ 828865 (-)
CI01000154_00756309_00761576 SLC37A4A, SLC37A4 coding downstream 403138 755829 ~ 762316 (-)
CI01000154_01213994_01216752 TMEM160 coding upstream 43000 1213084 ~ 1216752 (-)
CI01000154_01267269_01269079 NA coding upstream 96091 1266175 ~ 1269079 (-)
CI01000154_01303717_01309218 NA coding upstream 133355 1303439 ~ 1309285 (-)
CI01000154_01316706_01317237 NA coding upstream 146597 1316681 ~ 1317421 (-)
CI01000154_01338824_01343731 NA coding upstream 168652 1338736 ~ 1345247 (-)
G362218 NA non-coding downstream 77241 1087941 ~ 1088213 (-)
G362153 NA non-coding downstream 104704 996453 ~ 1060750 (-)
G362148 NA non-coding downstream 184503 980664 ~ 980951 (-)
G362145 NA non-coding downstream 193842 959794 ~ 971612 (-)
G362143 NA non-coding downstream 211401 953765 ~ 954053 (-)
G362250 NA non-coding upstream 77172 1247256 ~ 1248164 (-)
G362271 NA non-coding upstream 106249 1276333 ~ 1277708 (-)
G362257 NA non-coding upstream 118933 1289017 ~ 1289723 (-)
G362317 NA non-coding upstream 132799 1302883 ~ 1303201 (-)
G362324 NA non-coding upstream 151588 1321672 ~ 1321978 (-)
CI01000154_01524327_01555571 NA other upstream 361633 1524267 ~ 1555647 (-)

Expression


Co-expression Network