XLOC_011726



Basic Information


Item Value
gene id XLOC_011726
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 48657825 ~ 48658162 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00024504
GTCACTGGCTTCAAGATCTTTGATTCTTAAAAAAGCCTTCACTGTTCCATCTCCATCCAAACTGATCCTTTTGCTTAAATTATCCTCTGGGAAAGAATTTTTGTTCCAGGTGTATCCCAGTAATGTAAATCCATGACCAAGTGATTGCTTGTACCAGAAGATCATTGTGTAGGTTGTGCTGTGTCCACATTCAAGATTTACAGAATCTCCTTTGGTTTTAATTAGATTTGAGGGGCTTTGTTTAACACTCCCATTGGCAACAGAACctatgaaaagaaacaaaatgagGTACATATTGTCAGAGCATGATGTTGCATTGCTATTAAATGACTATCAAT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00024504 True 338 lncRNA 0.37 1 48657825 48658162

Neighbor


gene id symbol gene type direction distance location
XLOC_011725 NA coding upstream 38641 48616823 ~ 48619184 (+)
XLOC_011724 LO018422.1 coding upstream 199036 48433817 ~ 48458789 (+)
XLOC_011723 smoc1 coding upstream 289594 48314724 ~ 48368231 (+)
XLOC_011722 plekhd1 coding upstream 451614 48164536 ~ 48206211 (+)
XLOC_011721 slc39a9 coding upstream 500647 48126944 ~ 48157178 (+)
XLOC_011727 NA coding downstream 3128 48661290 ~ 48661644 (+)
XLOC_011728 daam2 coding downstream 173417 48831579 ~ 48892781 (+)
XLOC_011729 NA coding downstream 239198 48897360 ~ 48904022 (+)
XLOC_011730 hs1bp3 coding downstream 289600 48947762 ~ 48961698 (+)
XLOC_011731 CABZ01088109.1 coding downstream 306470 48964632 ~ 49019651 (+)
XLOC_011720 NA non-coding upstream 911613 47745402 ~ 47746212 (+)
XLOC_011719 FP015963.1 non-coding upstream 1266191 47391517 ~ 47391634 (+)
XLOC_011718 BX663528.1 non-coding upstream 1406512 47238338 ~ 47251313 (+)
XLOC_011717 BX663528.2 non-coding upstream 1459833 47197876 ~ 47197992 (+)
XLOC_011734 NA non-coding downstream 756658 49414820 ~ 49421370 (+)
XLOC_011737 LO018408.2 non-coding downstream 852704 49510866 ~ 49511000 (+)

Expression



Co-expression Network