XLOC_011727



Basic Information


Item Value
gene id XLOC_011727
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 48661290 ~ 48661644 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00024505
TCAGTCTGTgttgttaatataaaataaattcacatAATAAACATTcttacaatatataatattacCTGCAAGGCATACTAGAGAAACACAAACACCTAAAAGCACGCTAGTCATCTTCACATTATGACAATGGTAAGAATGAACAGCAAGAAGGAACTTCTAACAGGAAATGCTGTCATCTCTTGGGGCACTGACAAAAAAGGACTGACAATTGGAGATTGTCAAAAATTTTATTCCTATTTAActattataattactatattttatccatgatctacagaagaaaaaatagagGTTATTAGTTATATTAAAGGGCAACGCagtagtgcagtaggtagtgctgtcgccttacagc

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00024505 True 355 lncRNA 0.33 1 48661290 48661644

Neighbor


gene id symbol gene type direction distance location
XLOC_011726 NA coding upstream 3128 48657825 ~ 48658162 (+)
XLOC_011725 NA coding upstream 42106 48616823 ~ 48619184 (+)
XLOC_011724 LO018422.1 coding upstream 202501 48433817 ~ 48458789 (+)
XLOC_011723 smoc1 coding upstream 293059 48314724 ~ 48368231 (+)
XLOC_011722 plekhd1 coding upstream 455079 48164536 ~ 48206211 (+)
XLOC_011728 daam2 coding downstream 169935 48831579 ~ 48892781 (+)
XLOC_011729 NA coding downstream 235716 48897360 ~ 48904022 (+)
XLOC_011730 hs1bp3 coding downstream 286118 48947762 ~ 48961698 (+)
XLOC_011731 CABZ01088109.1 coding downstream 302988 48964632 ~ 49019651 (+)
XLOC_011732 tiam2a coding downstream 420184 49081828 ~ 49218502 (+)
XLOC_011720 NA non-coding upstream 915078 47745402 ~ 47746212 (+)
XLOC_011719 FP015963.1 non-coding upstream 1269656 47391517 ~ 47391634 (+)
XLOC_011718 BX663528.1 non-coding upstream 1409977 47238338 ~ 47251313 (+)
XLOC_011734 NA non-coding downstream 753176 49414820 ~ 49421370 (+)
XLOC_011737 LO018408.2 non-coding downstream 849222 49510866 ~ 49511000 (+)
XLOC_011738 NA non-coding downstream 890249 49551893 ~ 49553677 (+)

Expression



Co-expression Network