CI01000158_01366017_01386733 (EDIL3B)


Basic Information

Item Value
gene id CI01000158_01366017_01386733
gene name EDIL3B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000158
NCBI id null
chromosome length 1938735
location 1365460 ~ 1386733 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000158_01366017_01386733.mRNA
CATCAGGCTGGGAAGAGGAATCTGTGATCGGGCCCTGCCACCCGAACCCATGTCACAACGGAGGGGTGTGTGAACACAGTGAGACATACCGCGGAGACACTTTTGTTGGATATTTGTGCAGATGTCCGCTTGGCTTCAATGGTGTCCACTGCCAACACAATGTTAACGAGTGTGAGAAAAATCCTTGCAAAAATGGAGGCAGCTGCACAGACCTGCGAGCAAACTACACCTGCCAGTGTCCCGGCGAATACATGGGGCGGAACTGTCAGTACAGTGGACGAACCGATGACAGCAATGACCCTAGGGAGGACATCTTAGGCTTCGAGAGTGAAGACAGCATCTCTGTGTGTGAGAGCAAGGACACAACATCCATCGATGAATCCAAGGACGTTGCATCCAAAAGTTCAGACCTGCCAGATGATTTTGAGGACAAAACGGAGAAAAATGCCATTTCCGGGGCCCATACGGAGTCTGTGGCAGGAACCTGCGAGAGCAAAAATGATATTATCATATTACCGTTTGAGACCAAGGAACACTGCATTTGTGAATGTTCTGGACCTTTGGGTATGGAAGGGGGGATCATTTCGAACCAGCAGGTAACAGCTTCCTCCACGCACCGAGCTCTGTTTGGACTGCAGAAGTGGTTTCCGTACTTCGCCCGACTCAACAAGAAGGGCCTCGTCAATGCCTGGAGTGCAGCCGAGGGCGATCGATATCCATGGATTCAGATAAATCTACAGCGGAGGATGAGGGTGACCGGACTGATAACACAGGGTGCCAAGCGAATCGGAAGCCCCGAGTATGTGAAATCATATAAAGTGGCATACAGCGATGACGGAAAGGCCTGGAGCATGTTTAAAGTCAAGGACACAGATGAGGACATGATATTCACAGGAAATACCGATAACAATGCCCCCTCGGCCAACTCCTTCAGCCCACCGATTGAAGCGCAATACATCCGTATTTACCCACAAGTCTGCAGGAAACACTGCACACTGCGAATGGAGCTCCTGGGCTGTGAGCTCACAGGATGCTCAGAGCCCATAGGGATGAAGACCGGACACATCCAGGACTATCAAATAACCTCCTCCAGTGTGTTTCAGACCCTGAACATGGACATGTTCTCCTGGGAACCCTCCAAGGCCAGACTGGACAAACAGGGCAAGGTCAATGCATGGACGTCAGCCCATAACGACCAATCACAGTGGCTGCAGGTGGATTTGCTGATTACAACCAAAATCACAGGAATTATCACCCAAGGAGCCAAAGATTTCGGGCATGTGCAGTTTGTTGGTTCCTTTAAATTGGCGTTCAGTAATGATGGAGAGAGATGGCTCATATATCAGGATGAGAAACAACAGAAGGATAAGATCTTCCAAGGAAACTTTGACAATGAAACGCACAGAAAGAACGTGATAGATCCGCCGATCTACGCCCGATTCATCCGGATTCTTCCGTGGTCGTGGTACGGACGCATCACTATGAGGGCGGAGCTTCTGGGCTGTCCGGAGGAACAGTGAAAGTTTGCCACATTTATGACAGACTGTGTAAAAATAACTTTAAACATTTCTAATGGTGATCTTTCAAGGATGCTGTTGAGACTTGTCTGATTTGAAAATGAAAGATCTTTTGATTACAGTCGATTATGATTGTGATGACTTTGAATGGATTTTTTTTTCTTTTTCCTGAAAATATCACAATGCTTTTCAAATGTTACTGTCACTGTACAAATGACTACTTTTATTTGAGAGTATAAACAGCTGAAGTAGGTCAATTGAATCCACTCAGGTCAAAGGTCACCTGCTAGAATAGTACTTTGAGTTCATGATTTATGAATAATAGAAGGAGGTACTGAGAACTGTTAACATTCTTACAAATTTATGTATATTAACTACTGAATGGTGTTCATTTGTAATTTATTAATATTCAATCAAAGCAAAATCAAAGAATGAATAGTAGGGGAGAGTGGGGTAAACTGTGCCGCTTATCAAGATTTATTTTACACAAACAAAGACTAAAGGTGTGGTCACTTTTACTGTATGGTGAATTTTTGTGGTTGAAAGCTTATTTAAATAAA

Function

symbol description
edil3b Predicted to enable calcium ion binding activity. Orthologous to human EDIL3 (EGF like repeats and discoidin domains 3).

GO:

id name namespace
GO:0005178 integrin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000158_01366017_01386733.mRNA True 2077 mRNA 0.45 10 1365460 1386733

Neighbor

gene id symbol gene type direction distance location
CI01000158_01341073_01343685 NA coding downstream 21425 1341073 ~ 1344035 (-)
CI01000158_01339302_01340074 HAPLN1B, HAPLN1 coding downstream 25386 1339236 ~ 1340074 (-)
CI01000158_01262724_01264911 NA coding downstream 100549 1262005 ~ 1264911 (-)
CI01000158_01247736_01251443 NA coding downstream 114002 1247559 ~ 1251458 (-)
CI01000158_01192157_01194797 SSBP3, SSBP2 coding downstream 170663 1192144 ~ 1194797 (-)
CI01000158_01410134_01419385 NA coding upstream 23262 1409995 ~ 1419665 (-)
CI01000158_01453526_01476090 MEF2C, MEF2CA coding upstream 66549 1453029 ~ 1476090 (-)
CI01000158_01487198_01495799 NA coding upstream 100056 1486789 ~ 1495906 (-)
CI01000158_01534561_01537689 MGC82201, CETN3.L, CETN3, BRAFLDRAFT_115461 coding upstream 147739 1534472 ~ 1538085 (-)
CI01000158_01561252_01564385 ARRDC3B coding upstream 174519 1561252 ~ 1564563 (-)
G364076 NA non-coding downstream 29525 1254047 ~ 1335935 (-)
G363972 NA non-coding downstream 151391 1204852 ~ 1214069 (-)
G364030 NA non-coding downstream 322204 1043002 ~ 1043256 (-)
G363963 NA non-coding downstream 369379 995019 ~ 996081 (-)
G364112 NA non-coding upstream 39290 1426023 ~ 1447805 (-)
G364103 NA non-coding upstream 65524 1452257 ~ 1501547 (-)
G364200 NA non-coding upstream 279197 1665930 ~ 1666140 (-)
G364109 NA non-coding upstream 282657 1669390 ~ 1671108 (-)
G364229 NA non-coding upstream 392477 1779210 ~ 1789155 (-)
CI01000158_00717478_00721819 STAMBPA, STAMBP other downstream 642948 717291 ~ 722084 (-)
CI01000158_00286848_00307666 NA other downstream 1050071 286545 ~ 307666 (-)
G364203 NA other upstream 301233 1687966 ~ 1688828 (-)

Expression


Co-expression Network