XLOC_011739 (CU929037.2)


Basic Information

Item Value
gene id XLOC_011739
gene name CU929037.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 49597112 ~ 49601114 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023280
CAGCCTTTTCATTCTTGACCCTCTAAGGGGTGTAAATGAACTGAAAGCCGCCCAAGATGCATGCCATAAGTTTGGAGCTTATTTCCACACGAGAAGACAAAACTATGGAAGGCAAGACTTGGTGCACATAAAATGGAAACCGAGCACAATTGAGCATTCATTTCAGGAAGATGATTCCAGCTGTGGTGTCTTTATAATGCTGATGGCCAAACAGGTGGTGGAACAGTTCCCAAAAATCCCTGAAAACATTGACATCACACCCAGCAAGGAAATGATGTGCGAGTACAGAAAGAATTTGGCTGAAGTAATATTGCTGGCATCAGTGTCAACGGCGGAGTGCTGCTCTGTGTGCGGAAAACACAATGACCAAAGTCAAGATGAATGCATCTGGatccAATGCAAAGTATGCCAGAGATGGTTTCATCTTTACTGCCTCAGGATGATTCTGCCACCAGAAGAACAACCATGGATTTGTGAATTGTGTTTGTAAGCTATTCAATCTCTATTGACTATTTGGTGTAATATGCGAATAGTTACTCGTTTTGCTGCACTTACTGCAACAGATTGAACGTTTGGAATTAAAAGTTGAAACAAAGTTAAAATGATTAACTTACATGCTGTCATGTATATTGGAAACTTTAGATAGAAGTTATCTGTTATGATACTTGTTATAGATTTGACTATTTTTGTTAGTCTAGAACCTTAATGCTTTGCATAGAATCACTCGAGTTCACGCTATTTTCAAAGCCTTATTTGCAACTACAAATcaatatgtaatgtttttttttggtcatttataGGCTGGTTTAGtgtttgaaatttaaaaaaaaaaaaaaaatgtctgaggTGCAGGGGATGTTGTGTTGTTTGTTGAAAATGTTTTGTGTACATATGGATGGTTCGTTGGCCAATAAATTGTTCTTCTTTAAACACAAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097188

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023280 True 936 lncRNA 0.37 5 49597112 49601114

Neighbor

gene id symbol gene type direction distance location
XLOC_011738 NA coding upstream 43435 49551893 ~ 49553677 (+)
XLOC_011736 AREL1 coding upstream 67067 49484640 ~ 49530045 (+)
XLOC_011737 LO018408.2 coding upstream 86112 49510866 ~ 49511000 (+)
XLOC_011735 CGA coding upstream 144610 49452032 ~ 49452502 (+)
XLOC_011734 NA coding upstream 175742 49414820 ~ 49421370 (+)
XLOC_011740 zgc:113372 coding downstream 36143 49637257 ~ 49642366 (+)
XLOC_011741 vps39 coding downstream 473258 50074372 ~ 50114272 (+)
XLOC_011742 CU655820.1 coding downstream 521129 50122243 ~ 50190705 (+)
XLOC_011743 galnt16 coding downstream 526534 50127648 ~ 50186571 (+)
XLOC_011744 zc2hc1c coding downstream 647038 50248152 ~ 50259782 (+)
XLOC_011731 CABZ01088109.1 non-coding upstream 577461 48964632 ~ 49019651 (+)
XLOC_011729 NA non-coding upstream 693090 48897360 ~ 48904022 (+)
XLOC_011747 NA non-coding downstream 824490 50425604 ~ 50426685 (+)
XLOC_011748 NA non-coding downstream 840784 50441898 ~ 50478262 (+)
XLOC_011753 NA non-coding downstream 1190765 50791879 ~ 50794536 (+)
XLOC_011756 NA non-coding downstream 1398159 50999273 ~ 51016383 (+)

Expression


Co-expression Network