XLOC_011775


Basic Information

Item Value
gene id XLOC_011775
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 52271297 ~ 52272517 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00024508
CACCcaaacacgtgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatacacacacacacttattcacacagacacacatgcacacaagcagactcattcacacacacacacacacacacacacacacacacacacacacacacacacacacacttattcacacagacacacatgcacacaagcagactcattcacacacacacacacacacacacacacacacacacacacttattcacacagacacacatgcacacaagcagactcattcacacacacacacacacatacatacacacacacacacacacatacacacacacacttattcacacagagacacacatgcacacaagcaaactcattcacacaaacacacacaaacacacacaaacacacacacacacacacacacacacacacacacgtgtgcatCCTGTCTTAATGCTCGTGTCTTCATCCACAGGTCTATAATTTATCCCAGAACGTTCAAGAAGTTGATCTGCAGCATCTTCAGATGTTCTGGATGTGTTGTTTAATGATGTCCTCCACACTAGGCTGAAGTGTAACAGCATTAATGTAGAGTAGTGAACGGGATGATAGTGTGTGTTTCTGAAGAGTTTTACTGATGGACTGAAGAACATGCAGAGAAAAGAGGAACAGCAGCGGCTCAGAGCGGATCTGTCTGACACTGCTTCTGCACCACTGTACACATCCTcactgcctgtgtgtgtgtgtgtgtgtgtgtatgtatgtgtttgtttgtgtttgtgtgaatgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtatatatatatatgtgtgtgtgtgcgtgcgtgcgtgttttcAGTCTCTGATGTTTCTGATCCGGGACTGGAGTTACCCGTATGAGCATCCTTACGGTCTGGAGGGAGGAAACCAGTTCCTGGAGAAGCGTctgcaggtgagtgtgtgtgtgtgactgagtgtgtgtgtgtgtgtgttctatacATCTGTGCTGTATTGTACGCTTATaatattagtttctatatttta

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00024508 True 1073 lncRNA 0.45 2 52271297 52272517

Neighbor

gene id symbol gene type direction distance location
XLOC_011774 NA coding upstream 136258 52131296 ~ 52135039 (+)
XLOC_011773 NA coding upstream 140479 52129692 ~ 52130818 (+)
XLOC_011772 ttll5 coding upstream 217346 51940768 ~ 52053951 (+)
XLOC_011770 flvcr2a coding upstream 342285 51906053 ~ 51929012 (+)
XLOC_011771 CU633997.1 coding upstream 363111 51908071 ~ 51908186 (+)
XLOC_011776 esrrb coding downstream 27501 52300018 ~ 52386518 (+)
XLOC_011777 NA coding downstream 201241 52473758 ~ 52474091 (+)
XLOC_011778 dlst coding downstream 251838 52524355 ~ 52553447 (+)
XLOC_011779 NA coding downstream 281187 52553704 ~ 52590848 (+)
XLOC_011780 angel1 coding downstream 340349 52612866 ~ 52643968 (+)
XLOC_011769 NA non-coding upstream 445815 51821696 ~ 51825482 (+)
XLOC_011761 NA non-coding upstream 652933 51493080 ~ 51618364 (+)
XLOC_011781 NA non-coding downstream 385522 52658039 ~ 52662430 (+)
XLOC_011782 NA non-coding downstream 396457 52668974 ~ 52671734 (+)
XLOC_011783 NA non-coding downstream 494787 52767304 ~ 52792053 (+)

Expression


Co-expression Network