XLOC_001182 (cpe)


Basic Information

Item Value
gene id XLOC_001182
gene name cpe
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 20839482 ~ 20911297 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001883
GGAGCCTGGTACAGTGTGCCTGGAGAGGGGGCCGTTTCCTGTTGGCGCTGCCACCTCAGCTGTCCAATCTGCCCCTGTCCACAAAGCTCGAGTGGTTTGGTCCACCATACTGCTTATCTTATCTGGAGCAGTCCACACCTTCATACCGAGGTGATGGAGGTAGAGGAAAAAAAGCAACAGGCTGCACATGAACCTGTGAGTTCAagcaaacatacaaacacactacTTGTAAAATGAATATCTATGTATGATGAGTAAAATGTGTGAATTTAGCACAATGTCATTAGAATTAGTTACATTAAACATTTACATGACATTAAACTAATAGCACTAATAATGTCTCTCATTAAGTCTTTTTATACTTCCTACCATTTTAACTTCAGTATTTCACTTTAAGGTTTGTTTATATATGTTTGGTTATAAATCCATTCTGTCACAAACTACTTGCAgaacccccacacacacatatactctgtAAAGCCGATCATAATGCACTTCCACTCTGGAGAGGAAACATATCTCACACAGCCAGAGACACAGACTCAAAGAGACACCAGTtcctgacacacacatacactctttaCTTAAGGAAAATCACAGCATGGTGATTTCCGTGTGCTGGTACAAGGCTGAAAGCTCAGCTCCTTTCAGAAATGACTTGACTGGGTGCCTCGtgtaattgtaaatgtatatttctGTGCAAGCGCACACGTTTAACAGCTGAATGTTTTTTCTATCTCTTCTTTTGCAGCTGTTCTGTTGCCTTGAAATCCTTTAATTGCACTGCTTTATGTACTTATA
>TCONS_00001884
AACAGGTAGTCAGGACTCGCGCAGACGCACGCATCACGTCACGACACAGAACAGAAACGAGAGAAAGAAGCGGACAGCGCAGAAAACAGGACGGACATCAGTACCAAAAGACACAGACGAGAAATACGCGACAGGCAGATAAGCGCCGAGTGTCTGGAGAGCGATGAGGGCGGCGGTGTTTTGCGGGGCTGTGTTGATGCTCGCACTGTCCTCGGTAAAAGAGGCTGAGGGCGAAAACGGAATTTCCTTTGAGTACCACCGCTATGAGGAAATGAGAAAATCGTTAGTATCTGTGTGGCTGCAGTGTCCATCCATCACCCGCATCTACACTGTAGGAGAGAGCTTTGAGGGTCGCGAGCTGCTCGTGCTGGAGATGAGCGACAATCCCGGGATACACGAGCCTGgtgAGCCGGAGTTTAAGTACATTGGAAACATGCACGGGAATGAGGCAGTGGGCAGAGAACTGCTCATCTATCTGGCTCAGTATCTCTGTAATGAATATCAGGAGGGCAACGACACCATCATTGACCTCATCCACTCCACACGCATACACATCATGCCCTCCATGAACCCCGACGGCTTTGAGAAGGCAGCTtcacagCCTGGTGAGATGAAGGACTGGTTTGTGGGCCGCAGCAACGCTCAGGGGATTGACCTGAACCGCAACTTTCCAGACCTCGACCGCATTGTCTACATGAACGAGAGAGAAGGAGGAGCAAACAACCACCTCCTGAAGAACATGAAGAAAGCTGTGGATGAAAACACCAAGctGGCTCCAGAAACTAAAGCTGTTATTCACTGGATTATGGACATTCCTTTTGTCCTGTCAGCCAATCTGCATGGTGGAGATGTGGTGGCAAACTACCCATATGATGAGACACGCAGTGGCTCTACTCATGAATACAGCGCTAGTCCAGATGATCTGGTCTTCAAGTCTTTGGCTAAGGCTTACTCCATCTATAACCCAGTGATGTCTGACACAAACCGGCCACCTTGCCGCAAGAATGATGATGACTCCAGCTTCAAAGAGGGCATCACTAATGGAGGAGCCTGGTACAGTGTGCCTGGAGGTATGCAGGACTTCAACTATCTGAGCAGTAATTGTTTTGAGATCACTCTGGAGCTCAGCTGTGACAAGTTTCCACCCGAGGACTCACTTAAACAGTACTGGGACCAGAACCGCAACTCACTGGTCAACTACATAGAGCAGGTTCACAGAGGAGTGTCAGGATTCGTTCGTGATCTGCAGGGAAACCCCATCTCAAACGCCTCTGTTTCTGTTGAGGGAATCGACCACGACATCaccacagctAAAGACGGTGACTACTGGCGCTTGTTGGCTCCTGGAAACTACAAAGTGTCTGCATCTGCTCCAGGATACCTGACTGTGGTCAAGAAAGTGGCCGTTCCCCACAGCCCCTCCACACGGCTGGACTTTGAGCTGGAGTCTCTGGAGGagaggaaggaggaggagaaggaggagctCATGGACTGGTGGAAGATGATGTCAGAGACGCTCAACTTCTaactcaaatacatcacaacaGTTTATGggtgtaaaatatttattgttgtcgtgtgtgtgtgctcatcaaCTTAAACAGCATAGAGTTTTTTTAGGGATCGTTTTACGCTAGAGGCACTGCGTCCAGACTTATTAACATTAGACATTTGCACATTCAAGTGGTCCTTGATTATGATTTGATTTTTTAATCTAAAACTGGGGTGTattagggtgacacggtggctcagtggttagcactggcgCTTCagagcaagaagatcactggtttgcgtcccggctggatcagttggcatttctatgtggagtttgcatgttctccctgtgttggtgtgggtttcctccgggtgctccggtttcttccacagtccaaacacatgcgctataggtgagttgaatcaactaaattgtccgtagtgtatgtgtgtgaatgagtgtgtatggatgtttcccagtactgggttgcagctggaagggcatctgctgtgtaaaacatgctggataagttggtggttcattccgctgtggtgacccctgatgaataaagtgactaatccgaagaaaaatgaatgaatggtgtgtATTATTGCAGTTTGAGCATAAACAACAGACTGCAATTTAATGATGCTCAAAGGGAGATACACTAGataaagtgattcattttttaaaaagaaagtaaacCCGCTGCCCTAAAAGTGAGTAatcccattgtaacttggaactgttgagttgacttaacttaatttttataattattagggatgtaacggtattgtaaataccgtcataccgcaatattaaattttttcgataaaactataggtcttcagagaaaatttgctcaggcgaatgaagcgaacgggaggtagctgaaactacatttcccatcagcccaggcgtggccataatcctttgcggtctgttgtcgctacagatccagtaatgcggaaatggagtgtgctgctagtagcggagatgaaaaaaagatggaaatgatcgaacctaaagcgggtgttgtcgccgcgcgcgtgctgaatagcggtgctgtcgcgcgcgttctgatcagctgtgttgtggcgcgcgtattgtaaagcgccgagggggggttgagcgcgcatactcaagagaggtgttttcgcgcgcctactgaagggctggactggacggaggttgtgtcgcgtcgcgggggcacttttgatcgttttggaagggcattttctatccaaaactaaaaagggcatgtgcactgcacaggttgagccctatgtgtgcacgtgcctgcaagttggggaatacgactaataacagtcatggggactgcagaaacacagcacactgttcagattgatgcagacattgacttgtaccgcaaagagaccctctatcttactcatggtttgtcctctcaagtgggggaaagacaatgcacaacgttacccactgctgtcaacatgggccaagtcatatctctcttgtcccagaaacctcattcccaaatgagagggtttttttctgttgcaggggacattgtaaatacccagagataccagcttttaccagattatatttatatgataattttcctttaaacccatctctatctaagtgagtgattaaatgttaaatgtgatgagttttcaacaatactaaattgaaactttatttttttacatggtttaataattttttgttattaaaattgaagttcctgtttcaaagctaacagatagatggctaatttgtatgtcattgacacttttggcacttttttggagtattttcaaaagttttttttttaccgtgacattcataccgaggtattaccgtaccgtgaaattctgataccgttacatccctaataattatgcatgttgtttatttacttaataattttaagctGATGAGTTTactcagttttttaaataaagtcaactcgTCGCTTTAAAGCagtccctgcaggcacaggacatcaacatgacgtcatattggcGTTGTACCCTAGTGTTGTGGGGatattggattttgtttggaaatgaaaatcaggttgacgtcagaacccagcGTCAGgtcgatgtcaatgtccaacctaaaatcaaccagatattaacgtctaatcatgttacacattgaagttgtgtggacgttaccactatgacatctatcagacgttggattttggtcactttccaacacaacctaaaattaaccaaatatcaatgttatttgacgtcgttattggacgtaAAAATAACGTTCTCAGATGCTGCCTAGATATTGAATTATGATCACCTGACGTCATCACCTAAatgtaacctaatattaacgtctaatgatgttgtgtgcctgctggggcaTGTTTACTTTCCTTCTAAGTGATCTTATTTTACGGTGTATTTTCTTATGCAGACTATAGAAGAAATGGCAGGTAAGGACAACGGCAAGATTCTTCCTTTATGTAAATTTTAGAGTTAATGATGTAAACCCATTATAACATTACTAACCCTAAAATTTACATAAAGCCTACCCCAGGTGTGGCATTTTCTTCAAATGTCCACTTGAGCAGCTAGTGAATCAGCACACACTaggccagctgaccaatcagagcccatTGTGTTTTTGTGAGGGAGGGGCTTCAGAAAACTAGACAGTCAACAGACTTCCAGAAGAGAATAGAAACggtaaaaaaacgtaaaatatgttaaatatattaaccaaagggcgtcacggtggcacagtgggtagcatgatcgcctcacagcaagaaggtgtctagttcgagccccagctgggtcagttggcatgttctccccgtgtccgtgtAAGTTTTCTCCAGGGTttcctccaaagacatgcgctataggtgaatcgaggaaactaaattctctgtagtgtatgtgtgtgaatgtatataggtgtttcccagtgttgggttgcagctggaagggcatccgctgcgtaaaacatatgctggataagttggaggttgattccgctgtggcaacccctatccttgtaaatatttatgttttacgCTAAAGATATGCAAGTCTGATGAAGTGCTGCTAATGTAAAGGTGGTCCTATTGCAAGTTTTATACACATTGTGTATCATTACCACATATAAGAAATGAAGATATCTTGTAGGATGTTTAACCAATCTGTTCTTCATTGTGTTTAACATTGATATTGtgaggtttgttttatttttttactatggtTTATTTGTAGCTAGGATCACCAATCTCACCAACCAATCAGAGAGCACTGTGTCGTGATGAATGTACGTGTCAGCAGTTTATTCTGATTATGAAAGCACTCATTTACACCCAATCACACGTCTCTTTCTGTTCAAACTCTGTGTGGGTTTCTGCTTGATGTTTTGAACGGGAGTGCTTTTGATAAACCCTTCATTTGCTGATTCTTTAACACTTACAGCTTTGATTATCGCATCAGATAATGAAAAAAATGGAAGAGGTTATCAACTGAACTCCTACCTTGTGTTATAAGAACTATATaggaaattaaataattataaacatatGATAGATTATAGCTATAaatcagtattatttatgtttgttgAGCAGAGAGTTTCATTTCAGATCATATAACGGCAGATTTTAACAGCACAAACTAAACGAATAGAGGTTATTTAGATCTGGTGGTTTTGTAATCTATACCAAAATGCACAATCTGTGATGAAGTACTATCTGCAGTCTTTATTACACATTCTGTaatatttattgtcttttttgtctgtttaaGTATCTTTATAAGTAGTGTTTTTGTTCTGTATTATGAAATGGCACGCTAATGCTACATCAATCATCGTTACGATCAAGTCTATAGTCACAATTTCTCATTGTTTCAACAGTTTATCCTCTGATTTTTGGGATGATCATGCTCATTTTGATTAAACTAGAGGCTTAAACCTTAAATATTATTAGCATTTCAAGCCAGCTTATATATTTCTCCTTTGAAACTTCAGTGGTATGTCTTGTATATGAATGTATCGAAGGTTTATTAAATGGAATGACGCAATTCACAGCCAAAATAAACTTCCCTTTCTGTTGTCA

Function

symbol description
cpe Predicted to enable metallocarboxypeptidase activity. Predicted to be involved in peptide metabolic process and protein processing. Predicted to act upstream of or within proteolysis. Predicted to be active in extracellular space. Is expressed in posterior pancreatic bud and retina. Human ortholog(s) of this gene implicated in type 2 diabetes mellitus. Orthologous to human CPE (carboxypeptidase E).

GO:

id name namespace
GO:0016485 protein processing biological_process
GO:0006508 proteolysis biological_process
GO:0006518 peptide metabolic process biological_process
GO:0005615 extracellular space cellular_component
GO:0004181 metallocarboxypeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
ko04940 Type I diabetes mellitus
ko01002 Peptidases and inhibitors
ko02042 Bacterial toxins

ZFIN:

id description
ZDB-GENE-090313-68 Predicted to enable metallocarboxypeptidase activity. Predicted to be involved in peptide metabolic process and protein processing. Predicted to act upstream of or within proteolysis. Predicted to be active in extracellular space. Is expressed in posterior pancreatic bud and retina. Human ortholog(s) of this gene implicated in type 2 diabetes mellitus. Orthologous to human CPE (carboxypeptidase E).

Ensembl:

ensembl_id ENSDARG00000055874

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001883 False 801 processed_transcript 0.41 2 20839482 20878076
TCONS_00001884 True 5597 mRNA 0.43 9 20866858 20911297
Loading

Neighbor

gene id symbol gene type direction distance location
XLOC_001181 tll1 coding downstream 13459 20733102 ~ 20826023 (-)
XLOC_001180 NA coding downstream 115131 20615209 ~ 20724351 (-)
XLOC_001179 ugt8 coding downstream 245704 20556067 ~ 20593778 (-)
XLOC_001178 NA coding downstream 286350 20459275 ~ 20553132 (-)
XLOC_001177 ndst3 coding downstream 566255 20147222 ~ 20273227 (-)
XLOC_001183 msmo1 coding upstream 5254 20916551 ~ 20928772 (-)
XLOC_001184 CT583646.1 coding upstream 18140 20929437 ~ 20930443 (-)
XLOC_001185 klhl2 coding upstream 20755 20932052 ~ 20970266 (-)
XLOC_001186 BX323083.1 coding upstream 69678 20980975 ~ 20986124 (-)
XLOC_001187 BX323083.3 coding upstream 79580 20990877 ~ 20996026 (-)
XLOC_001175 NA non-coding downstream 815743 20003654 ~ 20023739 (-)
XLOC_001173 BX323590.4 non-coding downstream 1051271 19787281 ~ 19788211 (-)
XLOC_001171 NA non-coding downstream 1138524 19689644 ~ 19700958 (-)
XLOC_001188 BX323083.2 non-coding upstream 89487 21000784 ~ 21005933 (-)
XLOC_001189 BX323083.5 non-coding upstream 99392 21010689 ~ 21015930 (-)

Expression

Expression of XLOC_001182(cpe) in the Zebrafish Sample from each Developmental Stage of PRJEB12982

Boxplot with 18 boxes. Box plot charts are typically used to display groups of statistical data. Each data point in the chart can have up to 5 values: minimum, lower quartile, median, upper quartile, and maximum.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Expression of XLOC_001182(cpe) in the Zebrafish Sample of PRJEB12982

Bar chart with 360 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000300_07689056_07718164 CPE coding CI01000300 null 7688880 ~ 7718437 (-)
bowfin (Amia calva) AMCG00015951 LOC106594914 coding CM030132.1 CM030132.1 31122668 ~ 31130956 (-)