CI01000174_00206636_00211375


Basic Information

Item Value
gene id CI01000174_00206636_00211375
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000174
NCBI id null
chromosome length 763745
location 206419 ~ 211561 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000174_00206636_00211375.mRNA
ACCTAAATGTATGGTTGTGCTTTACATAGGCGATCGATCTATATCGGCTGAATCACTATCAGTCTGTGCATTTTATAAATCCCGCAGACTGTTTGAGTAATCCGGGCTCGCCCACGTGGGCTGATCTGCTGAGGGAGCGCTGAAGAGACTCGCGCGCAGCTCGCTCTCCGTTACTCAGCTGAAGCCATGGCAACAGAAGGGCAGAAAGTGGTGCTGATCACCGGCTGCTCGTCCGGTATCGGGATGGGCATCGCCGTGATGCTCGCGAGAGACGAGATGAAGCGCTACTACGTCATAGCTACGATGCGGGATCTGAAGCGGAAGGATAAGTTGGTTGAAGCGGCTGGAGACGCGTACGGGCGAACTCTGTCTCTGCTCACGCTGGACGTCTGCAGCGATGAATCTGTCAAACAGTGTGTCGACAGCATCAAAGATCGACATATAGACATACTCATCAATAACGCTGGCGTCGGTCTGGTGGGGCCCATTGAGGCTCTCAGTCTGGACGACATGAAGCAGGTGTTCGAGACCAACTTCTACGGTGCGGTGCGCATGATTAAAGAGGTCATGCCCGACATGAAGAGGAGACGCTCTGGACACATCGTCGTCATCAGCAGCGTGCTGGGCCTGCATGGTGTGGCGTTTAATGACGTCTACTCTGCGTCAAAGTTCGCCACGGAGGGATTGTGTGAGGGTCTCGCCATCCAGCTGCTCAAGTTTAACGTCTCTGTGTCGATGATCGAGCCCGGGCCTGTAAACACAGAGTTTGAGATGAAGTTGATGGCAGACGTTTCTAAGAAAGAGTTCATCGGTGCTGATGCCGAGACGCTCTATCACTTCAGGAACTGCTACCTGCCCACTCAAGTGAACCTCTTTCAAGGCCTGGGACAAACACCTGAAGACATCGCCAAGTCGCCTCATCCTCCATTCCGTAACCTGACGAATCCTCTGTACACTCCGATCGTGGCGCTGAAGTATGCGGACGAGACGCGCAGCCTGTCTATTCACACCTTCTATCACATGCTGTACAACCTGGGAGGAGTCATGGATGTTAGTGTGAGACTCATGAAGTACCTGACCCCTGGATGGTTACGGAGACGAACCATCTCACCAGCCTAACACACACATCTCCTGAGAATACTTACAAAGATCAATCATCTCGTCTAACAGATGCACACAAACACTCTATGGACACACTGAAGCTCAAGTCGCCATTGGCTAGTAAATCCTTTTTACTTTTATGTGGAATGCAAGAACAATACATTCCACGTAAAAAGTATAATATAAAAAATACATTTCAAACATTATTAAATACAAATAAACATTCTGTAATAAA

Function

NR:

description
photoreceptor associated retinol dehydrogenase type 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000174_00206636_00211375.mRNA True 1336 mRNA 0.50 6 206419 211561

Neighbor

gene id symbol gene type direction distance location
CI01000174_00113659_00119731 PARN coding downstream 86560 113291 ~ 119859 (-)
CI01000174_00075159_00075532 NA coding downstream 130887 75064 ~ 75532 (-)
CI01000174_00072058_00073141 THUMPD1 coding downstream 133278 71845 ~ 73141 (-)
CI01000174_00067468_00069004 NA coding downstream 136374 67365 ~ 70045 (-)
CI01000174_00051160_00054837 NA coding downstream 151582 51094 ~ 54837 (-)
CI01000174_00213939_00219999 NA coding upstream 2174 213735 ~ 219999 (-)
CI01000174_00364911_00370439 SOUL5L coding upstream 152705 364266 ~ 370439 (-)
CI01000174_00372791_00383900 GPR108 coding upstream 161132 372693 ~ 384141 (-)
CI01000174_00418999_00423108 NA coding upstream 207438 418999 ~ 423108 (-)
CI01000174_00433771_00444896 NA coding upstream 222210 433771 ~ 444896 (-)
G373362 NA non-coding downstream 35741 170373 ~ 170678 (-)
G373361 NA non-coding downstream 36151 169933 ~ 170268 (-)
G373344 NA non-coding downstream 38750 81069 ~ 167669 (-)
G373357 NA non-coding downstream 46132 158125 ~ 160287 (-)
G373328 NA non-coding downstream 158684 43960 ~ 47735 (-)
G373377 NA non-coding upstream 26102 237663 ~ 265325 (-)
G373393 NA non-coding upstream 38207 249768 ~ 253075 (-)
G373375 NA non-coding upstream 56909 268470 ~ 272172 (-)
G373372 NA non-coding upstream 62730 274291 ~ 275903 (-)
G373395 NA non-coding upstream 74817 286378 ~ 286661 (-)
G373338 NA other downstream 77599 126536 ~ 128820 (-)
CI01000174_00642752_00643518 NA other upstream 431198 642719 ~ 643706 (-)
CI01000174_00741688_00755085 NA other upstream 529788 741646 ~ 755085 (-)

Expression


Co-expression Network