Item | Value |
---|---|
gene id | XLOC_011886 |
gene name | sash1b |
gene type | coding |
species | zebrafish (Danio rerio) |
category of species | model fish |
Item | Value |
---|---|
chromosome id | NC_007128.7 |
NCBI id | CM002901.2 |
chromosome length | 53461100 |
location | 6985428 ~ 7060477 (-) |
genome version | GRCz11_2017_zebrafish_Genome |
symbol | description |
---|---|
sash1b | Human ortholog(s) of this gene implicated in dyschromatosis universalis hereditaria. Orthologous to human SASH1 (SAM and SH3 domain containing 1) and SAMD5 (sterile alpha motif domain containing 5). |
id | description |
---|---|
ZDB-GENE-110228-1 | Human ortholog(s) of this gene implicated in dyschromatosis universalis hereditaria. Orthologous to human SASH1 (SAM and SH3 domain containing 1) and SAMD5 (sterile alpha motif domain containing 5). |
ensembl_id | ENSDARG00000058853 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TCONS_00023490 | False | 6151 | mRNA | 0.44 | 15 | 6985428 | 7028418 |
TCONS_00023489 | False | 5978 | mRNA | 0.45 | 17 | 6985428 | 7028418 |
TCONS_00023491 | True | 6070 | mRNA | 0.45 | 20 | 6985428 | 7060477 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
XLOC_011885 | UST | coding | downstream | 1090 | 6969846 ~ 6984338 (-) |
XLOC_011884 | CU469532.1 | coding | downstream | 26698 | 6958610 ~ 6958730 (-) |
XLOC_011883 | zbtb24 | coding | downstream | 30346 | 6935280 ~ 6955082 (-) |
XLOC_011882 | CR352340.1 | coding | downstream | 219551 | 6763586 ~ 6765877 (-) |
XLOC_011881 | vsnl1b | coding | downstream | 226279 | 6715575 ~ 6759149 (-) |
XLOC_011887 | SAMD5 | coding | upstream | 63582 | 7124059 ~ 7218481 (-) |
XLOC_011888 | stxbp5b | coding | upstream | 168907 | 7229384 ~ 7351488 (-) |
XLOC_011889 | rab32b | coding | upstream | 304434 | 7364911 ~ 7371564 (-) |
XLOC_011890 | grm1b | coding | upstream | 320073 | 7380550 ~ 7440397 (-) |
XLOC_011891 | si:ch211-278p9.1 | coding | upstream | 379981 | 7440458 ~ 7484354 (-) |
XLOC_011871 | NA | non-coding | downstream | 703788 | 6224873 ~ 6281640 (-) |
XLOC_011868 | CU571076.1 | non-coding | downstream | 971757 | 6013555 ~ 6013671 (-) |
XLOC_011866 | NA | non-coding | downstream | 1012017 | 5961811 ~ 5973411 (-) |
XLOC_011892 | NA | non-coding | upstream | 404363 | 7464840 ~ 7466352 (-) |
XLOC_011894 | BX296541.1 | non-coding | upstream | 443632 | 7504109 ~ 7505978 (-) |
XLOC_011895 | NA | non-coding | upstream | 448581 | 7509058 ~ 7534318 (-) |
XLOC_011896 | BX511121.1 | non-coding | upstream | 583054 | 7643531 ~ 7711939 (-) |
XLOC_011901 | NA | non-coding | upstream | 1121244 | 8181721 ~ 8182704 (-) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
---|---|---|---|---|---|---|
grasscarp (Ctenopharyngodon idella) | CI01000310_02182311_02203097 | SASH1B | coding | CI01000310 | null | 2181543 ~ 2203097 (-) |