CI01000177_00061966_00080120


Basic Information

Item Value
gene id CI01000177_00061966_00080120
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000177
NCBI id null
chromosome length 204033
location 61966 ~ 80120 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000177_00061966_00080120.mRNA
ATGGCCTCAAAGAAAACTGAATCGAAGAAAAACGAGAAAACGGATAAATCTGAAAAGGCTTTAGCAGCGGAAAAGGAGCAATTCGTCAAACTACAGTATATTGTCCTAAACATTTGTACAGAGATCATTTTAGGCACACATAAGGAAGGCGGCGCCGTCACGTTCTGGTCTCATGCTGTGAGTCTACCGCTGTCCAGCAACGCCATCCTCAGCTGGAAGTTCTGCCACATGGTGCACAAACTGCTACGAGATGGCCATCCCAACACTTTACGAGACAGCAGAGGTCACACCGCAGGCATCAGACAGATGGGCACATTATGGCATCTGGAAATCCCACCAAACCTTGAAGCTCCTGAGGAAGTTCTTGATAAAGCCATTGCCATTGATATCAACAAAGTGTTTGACATGACAGGTGAGGTTCTGGACTACATGGAAGCAGCTCTAAAGCTGCAGGAAACAGGAATACCCATGGACGCTCTGTTAGGACACAGGGAACGATTCCGCGAGCAGTTCAACAGTTTGACACAGTTTTTCGAGAGAGCGAGAGGGATGGAGTTTTTCAAAACTATTATTCAGATCCCTGATCTTCCTAATGAGCCTCCGAATTTCCTGCGTGCAGCTTCACTCGCGGATCACGTGAAACCCGTGGTCGTTCAGAACGAGAGAATACCTGACGATGATGATACGGAGACGCAGCTGGATTTTGGTGAAGGACAGTACCAGATGTATTACGGTTACAACCAGTTTGACCCTCCAAGTGACATACCAGAGCAAAGAGAGACTGAGGCTGATACTCTGAGGAAGGAACTCGAGGTGGTGAAACCAGAGCTGGAGCTCATAAAAGTGGAGGCCCAGCGTGCCGTGGTCCAGCTCAAAACACAAGTGAATAAACTGGAATCTGAGCTTGAGGACCAGCGGACGCACAAGCAGATGGCGCTGGTGGAGAACGAACGACTGCGCATGGAGGTGGAGAACCTCAGAGCCCAGACCGCAGTCGCTGCCAACATTCAGGCCACAGCTGATGACGCGGGCAGCAGAGCTCAAACTGCTCAGATACACTTCTCACGACTCAAAGAGAAACACGCCGAGCTGGTCAGCAGACATGCTGATCTCATGCGGAAGAATACAGAGATGATGAAGCAGATCAGCAGCACTCAGCAAGCACAGGAGGAGCTGCTCACGGCCAAACAACAGATGGCGATAGAGATACAACAACTGAGACAGGACAACAGCGCCCAGCTGGAGGCACAGAGAGCAGAAATTGAACGTTTGAAACATGAGCTAGCAATCGAGAGGGCTGAAATGTCCCAAGTCCATAACACTTTGCAGAGCAAGGAGAAGGCTGGAGATGAGCTGGGCAGTTTGTTGGTGGGTCTGCAGGCAGAAAAAGAGGCACTCCTTCGTATAGTTAAAGATCAGGAAGCTGAGATCGCTAGTCTGCGTCAGGCCGTCCAATTCCACCAGACCACCCTACAGCAGGAGAGAGACCGACATCAGAGAGAGATGACAGCACTGCAGAACCAACTGCAGGAAAAATTGTGTCGGGAACAGGAGCAGCAGCTGGAGATGGAGAAACTGAGACGCGAGCTGGAGGAGAAGCGAGCAGAGGCGCTGCGTGCTCAGAGCGCTCTGAACAGTAAAGAAACTACAGGAGACCAGCTGAGCAGCGTGTTAGTGGGTCTGCAGGCAGAGAAGGAGGTTCTTCTACGTTCAGTGAGAGAACAGGAGGCCGAGATCACTAACATGCGTCAGGCCGCCCAACTCCACCAGGCCACGCTGCTGCAGGAGAAAGACAGATATCAGAGAGAGGTGGCAGCGCTGCACAACCAAATGCAGGCTAAGTTGAGTCAGGACTCAGGAGTTTTGCAGCAAAGGCTTCAGGACGAGCAGTTTAGTCTGTTGCAGTGTGCCGTGGTGGAGGCCGAGGGCATCGTGCTGGACGCCGTGGCCAAAGTGGATGATCCGCTACATGTGCGCTGCATCAGCACCCCAGATTATTTGATTAATCGGGCCGAGTTGACGTTGGCATCCATTGATAAGATGCAGCAGAGTCATGCGGCCTATTTAAGGAATTATGATGGTAAGGTTGCTCTCATCAATGCAAGTGGTTTGTTGAGGTCGGTGACCCAGTTCTCCCATCTCATCGCTGACACTATTGTTAACGGAGCAGGCACTGCCCATTCAGCACCAACGGACCAAGCTGACCGTTTGACGGATAACTGTCGGGATTGTGCCACTCACTGTCTCCAGTACCTGAAAGAGCTGAAGATGAAGGCCACCCTCCCAAGAGCAGACCCCACTGCCGTCCGCTACGTGGTCCAGCGTATCCTCAACCAAGGACAGGACCTGCGGCCCAGGGGAGCAGACGTACGGAAGGAAGAGCTGGCAGATATGGTTGATAAGGAAATGGCTGCAACTTCCTCTGCCATTGAAGATGCTGTGCTGAGAATGGATGAAATATTGAGCCAGGCAAGAAGAGATACATCTGGAGTGAAACTGGAAGTTAACAAAAGCATCATTGGCTCCTGTTCGGATCTAATGAAGGCTATACACATGCTGGTGATGGCCTCTACTGACCTGCAGAGAGACATTGTGGAAAGTGGCCGGGGTGCCGGTTCTGTTAAAGACTTTTATGCTAAAAATTCACGTTGGACGGAGGGTCTCATCTCTGCATCAAAGGCTGTTGGATGGGGTGCAACGCAGATGCTTGAATCAGCTGATAAAGTCGTGACTGATAAAGGAAAATATGAAGAGCTGATTGTCTGCTCTCATGAGATCGCGGCCAGTACGGCACAGCTTGTCGCTGCTTCAAAGGTAAAGGCGGATCGAGGCAACAAGAAGCTCCATGCTTTACAGCAGGCATCCCGCCACGTGAACGACATGGCCGCTGTTGTGGTGACATCTACCAAGTCAGGACAAATGCAGATTGAGGACAAAAACTCCATGGACTTTTCTGGCCTGTCTCTTATAAAGCTCAAAACAGAAGAAATGGATTCCCAGGTGAAAGTGTTAGAGTTGGAGAAGCAGCTGGCGAACGAGCGCGTACGGTTGGGAGAGCTCAGGAAAAAGCACTACGAGATAGGAGGGATCCCAATGGACTCGCCTCCAGAGAGCGCAGTCAATAGTTTCGACAGTTCACTGCCTACCGTTTTTCCTGATCCACCCACAATGGAACTGCCCAGTCTGGATGTGTTCACACTGGATCTACCCAGATTCGAACCTCTTAGACTGGACCCGCCCGGACCAGAGCCCCCCGCACCCGAGCCTGCCAAAACCAGCTCTAAACGAACCTCAATCTTTCATAAATCAGGCAGCATCCTCAAGAATGCA

Function

NR:

description
Zgc:158784 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000177_00061966_00080120.mRNA True 3330 mRNA 0.51 30 61966 80120

Neighbor

gene id symbol gene type direction distance location
CI01000177_00050469_00056013 NA coding upstream 5784 50469 ~ 56182 (+)
CI01000177_00081319_00089885 RILPL1 coding downstream 1199 81319 ~ 89885 (+)
CI01000177_00119283_00126859 SBNO1 coding downstream 39163 119283 ~ 126859 (+)
CI01000177_00133004_00135222 CDK2AP1 coding downstream 52884 132908 ~ 135890 (+)
CI01000177_00156585_00162274 NA coding downstream 76465 156585 ~ 162274 (+)
CI01000177_00184252_00189231 NA coding downstream 103950 184070 ~ 189619 (+)
G373775 NA other downstream 26644 106764 ~ 110993 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_003083 hip1ra coding NC_007121.7 CM002894.2 44473851 ~ 44482911 (-)