CI01000177_00081319_00089885 (RILPL1)


Basic Information

Item Value
gene id CI01000177_00081319_00089885
gene name RILPL1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000177
NCBI id null
chromosome length 204033
location 81319 ~ 89885 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000177_00081319_00089885.mRNA
ATGGAGGATTTCGGTTCGGCGCTGGAGAAGAACGTGGCGGATCTGACCGTGATGGACGTGTATGATATCGCCGCAGTGGTGGGTCAGGAGTTCGAGCGCATTATTGATCAGTACGGATGTGAGGCTCTGTCCCGCCTCATGCCCAAAGTGGTCCGGGTGCTGGAGATCCTGGAGGTTATGGTGAGCCGGAACAGCATCAGTCCAGAGACCGAGGAGCTGCGTCTGGAGCTGGACCGCCTCCGACTGGAGCGGATGGACAGACTGGAGAAGGAGAAGAAACATAAAAAGACATTACTTAACTTCAATGAAGAACAGGAGCTGGAGTTGGTTGAGGATGTGTGGAGAGGAGAAGCCCAGGATCTGTTGTCCCAGATCGCCCAGCTGCAGGAGGAAAACAAAACGCTGCTCAACAACCTGTCCGTCAAAGAGTGTCCGATGACGGAAGAGGACATACAGAAACAGGAAGGCATGACCGAGAGGGAGCGGCAGGTGATGAAGAAGCTGAAGGAAGTTGTAGATAAACAGCGAGACGAGATCCGCGCCAAAGACCGTGAGCTGACGCTCAAAAACGAGGACGTTGAAGCGGTAAGGAGCTATGTTCTTCCTGAGCAAAACCTGTTCAGCCACTGTTTTTATCTCAAGAAAACAAGACACAAAAATGTCAGTCTTTTTGCTGGAAAAGTCATCAAAGTCACACCCTATGTAATGTGTGGTTTCACTCTGAAATTCATCATACTGTGCATGTTTAATGCATCGCAAATGCTGTTGAATTTCTTCCAGCTCCAGCAGCAGTTGAACCGGCTGATGAAGATCAACCATGACCTGAGGCATAAGATCACGGTGGTGGAGGCCCAGGGTAAAGCCCTGATCGAGCAGAAGGTGGAGCTGGAGGCGTCTGGTCAGGCAAGACAGCAGGAGCTTGGTAACCTCCGACAGGAAGTGGTCCGTCTTAAGGAGCGACTGAAAGAACAGGGCAAGATCAGCGCGGAGACAGAGGAGCCTGTAGGGCCGCCCTCACCTGCACAGGAGGCGCTGTGTGATGATGACATGTCCAATCTAGATCCAAAAGACCCGAACCGCCCACGATTCACCCTGCAAGAGCTGCGGGACGTCCTGCATGAGCGCAATGAGCTGAAAGCTAAAGTCTTCATGCTGCAGGAGGAAATCGCCTATTACAGAAGTGAAGAACAGGAGGAGGAAACAGGCCCATCCCTGCCAGACCCCTCTCCTACCCTTCGGCCCAGCTCTCGCTCCAACTTTCAGCCCGAGTCAGGGATAAAACGACT

Function

symbol description
rilpl1 Predicted to enable protein dimerization activity. Predicted to be involved in several processes, including cilium assembly; epithelial cell morphogenesis; and protein transport from ciliary membrane to plasma membrane. Predicted to act upstream of or within protein transport. Predicted to be located in centrosome; cilium; and cytosol. Predicted to be active in ciliary basal body and cytoplasm. Orthologous to human RILPL1 (Rab interacting lysosomal protein like 1).

GO: NA

KEGG:

id description
K20173 RILPL1; RILP-like protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000177_00081319_00089885.mRNA True 1286 mRNA 0.53 6 81319 89885

Neighbor

gene id symbol gene type direction distance location
CI01000177_00061966_00080120 NA coding upstream 1199 61966 ~ 80120 (+)
CI01000177_00050469_00056013 NA coding upstream 25137 50469 ~ 56182 (+)
CI01000177_00119283_00126859 SBNO1 coding downstream 29398 119283 ~ 126859 (+)
CI01000177_00133004_00135222 CDK2AP1 coding downstream 43119 132908 ~ 135890 (+)
CI01000177_00156585_00162274 NA coding downstream 66700 156585 ~ 162274 (+)
CI01000177_00184252_00189231 NA coding downstream 94185 184070 ~ 189619 (+)
CI01000177_00198200_00203950 PITPNM2 coding downstream 108315 198200 ~ 203950 (+)
G373782 NA non-coding upstream 12467 17574 ~ 68852 (+)
G373775 NA other downstream 16879 106764 ~ 110993 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00018797 NA misc CM030135.1 CM030135.1 20644885 ~ 20678437 (-)