CI01000177_00133004_00135222 (CDK2AP1)


Basic Information

Item Value
gene id CI01000177_00133004_00135222
gene name CDK2AP1
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000177
NCBI id null
chromosome length 204033
location 132908 ~ 135890 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000177_00133004_00135222.mRNA
GTATGTCTTACAAACCCAATCCCCATCAACACCTTCCGGGAACTTCTGGGAACCAAGGTATGCCGAAAAAGCGTGGAAAACTCTTCGTCTTGAGTGTATTTGGTCGAATGGTCAGATCCTTCACATCCGCCATTATTACTAGTGAAAAAAACGCATTCCTCGCCTTCGATAGGGCTAAATATCGGCGTGAGGTACATTTTCGGGTTCTTCCCGAAGGGTCCGCGTCGCGCCGTGGCCGGATGGGAAACATTCCTTCTCCATCTTCCATGGCAACAATACAGTCATTTAAGCCAATTCTTAATGACTTCGGACCACCGTCACTGGGATTCCCACAGGGTCCAAATGGAAACCAAGTACCTCAGAGTAAATATGCTGAACTCCTCGCCATCATTGAAGAACTTGGGAAAGAAATAAGGCCAACATATGCAGGGAGTAAAAGCGCCATGGAGCGACTTAAAAGAGGTATCATTCATGCCAGAGGGCTTGTTCGGGAGTGTCTGGCAGAGACAGAAAGAAACGCGAGATCCTAGCGCCTCCTTCCTCATTCTCTCCATACGGGCTGAAAGAACTGTGTCTTCTTATACCGTCACACGGGAATCATGCATGCCTTTCCTTTGAGGGGGATAAACAATCAACAAGTGGAGCATTTATGTTACGAGTTGCGCTTTTCATCTGTGGTTTGGAGGGAATAAGGCACGACACAGAGAATATATCTTCTGATTTATAAATGCAAGAGATCTGGAACTGTTGCCATTTGAGTTGTTTTTATATATTTCATTTTCTTTGACCACATAGTATCTTTAAGAACAAATAAGCAAAAATGCATGCAATCGGTTTAAAGGTCCCACATTAGAATCTGCATGGCTTTTACAGGTTAGACTAGGTATGTGCTTTTAGAAATAGGTCTCAGGATAATAAGGTATTTTCTCCTCGGACACACAATTTTCTTTTAATTGGGGAGATACTGAAAAGTATTATAGTGATGCCATTACTTTCGTCTTTATTTGTATTTATTACCTTGTGTAATACAATGTATTTTCATGTAAAGACAAAAAAGGTCACTCTTTGGAATTTTGTATAACTGTCA
>TU427006
CCGGTGCTGCTCCGCTGTAAACAAAAAGTGTCTGTGAGACGGACGCTCCGCTGATTTTAGGGACAATTTTATTTCTCTCATTTATTATCTCTTCAGGTATGTCTTACAAACCCAATCCCCATCAACACCTTCCGGGAACTTCTGGGAACCAAGGAAACATTCCTTCTCCATCTTCCATGGCAACAATACAGTCATTTAAGCCAATTCTTAATGACTTCGGACCACCGTCACTGGGATTCCCACAGGGTCCAAATGGAAACCAAGTACCTCAGAGTAAATATGCTGAACTCCTCGCCATCATTGAAGAACTTGGGAAAGAAATAAGGCCAACATATGCAGGGAGTAAAAGCGCCATGGAGCGACTTAAAAGAGGTATCATTCATGCCAGAGGGCTTGTTCGGGAGTGTCTGGCAGAGACAGAAAGAAACGCGAGATCCTAGCGCCTCCTTCCTCATTCTCTCCATACGGGCTGAAAGAACTGTGTCTTCTTATACCGTCACACGGGAATCATGCATGCCTTTCCTTTGAGGGGGATAAACAATCAACAAGTGGAGCATTTATGTTACGAGTTGCGCTTTTCATCTGTGGTTTGGAGGGAATAAGGCACGACACAGAGAATATATCTTCTGATTTATAAATGCAAGAGATCTGGAACTGTTGCCATTTGAGTTGTTTTTATATATTTCATTTTCTTTGACCACATAGTATCTTTAAGAACAAATAAGCAAAAATGCATGCAATCGGTTTAAAGGTCCCACATTAGAATCTGCATGGCTTTTACAGGTTAGACTAGGTATGTGCTTTTAGAAATAGGTCTCAGGATAATAAGGTATTTTCTCCTCGGACACACAATTTTCTTTTAATTGGGGAGATACTGAAAAGTATTATAGTGATGCCATTACTTTCGTCTTTATTTGTATTTATTACCTTGTGTAATACAATGTATTTTCATGTAAAGACAAAAAAGGTCACTCTTTGGAATTTTGTATAACTGTCAATAAATATGACATTC
>TU427007
CCGGTGCTGCTCCGCTGTAAACAAAAAGTGTCTGTGAGACGGACGCTCCGCTGATTTTAGGGACAATTTTATTTCTCTCATTTATTATCTCTTCAGGTATGTCTTACAAACCCAATCCCCATCAACACCTTCCGGGAACTTCTGGGAACCAAGGAAACATTCCTTCTCCATCTTCCATGGCAACAATACAGTCATTTAAGCCAATTCTTAATGACTTCGGACCACCGTCACTGGGATTCCCACAGGGTCCAAATGGAAACCAAGTACCTCAGAGTAAATATGCTGAACTCCTCGCCATCATTGAAGAACTTGGGAAAGAAATAAGGCCAACATATGCAGGGAGTAAAAGCGCCATGGAGCGACTTAAAAGAGGTATCATTCATGCCAGAGGGCTTGTTCGGGAGTGTCTGGCAGAGACAGAAAGAAACGCGAGATCCTAGCGCCTCCTTCCTCATTCTCTCCATACGGGCTGAAAGAACTGTGTCTTCTTATACCGTCACACGGGAATCATGCATGCCTTTCCTTTGAGGGGGATAAACAATCAACAAGTGGAGCATTTATGTTACGAGTTGCGCTTTTCATCTGTGGTTTGGAGGGAATAAGGCACGACACAGAGAATATATCTTCTGATTTATAAATGCAAGAGATCTGGAACTGTTGCCATTTGAGTTGTTTTTATATATTTCATTTTCTTTGACCACATAGTATCTTTAAGAACAAATAAGCAAAAATGCATGCAATCGGTTTAAAGGTCCCACATTAGAATCTGCATGGCTTTTACAGGTTAGACTAGGTATGTGCTTTTAGAAATAGGTCTCAGGATAATAAGGTATTTTCTCCTCGGACACACAATTTTCTTTTAATTGGGGAGATACTGAAAAGTATTATAGTGATGCCATTACTTTCGTCTTTATTTGTATTTATTACCTTGTGTAATACAATGTATTTTCATGTAAAGACAAAAAAGGTCACTCTTTGGAATTTTGTATAACTGTCAATAAATATGACATTCATTGTGTATGAAATGTTTTTGTTTATTGTCTTGCAAAAGACTTGCATTGTACAATATTACTATCCTTACGTAAATATAACATGGTAACGGTTTCCA

Function

symbol description
cdk2ap1 Enables DNA polymerase binding activity. Involved in positive regulation of protein phosphorylation. Located in cytosol; nucleoplasm; and perinuclear region of cytoplasm.

GO:

id name namespace
GO:0070182 DNA polymerase binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000177_00133004_00135222.mRNA False 1087 mRNA 0.42 5 133004 135779
TU427006 False 1012 TUCP 0.40 4 132908 135794
TU427007 True 1108 TUCP 0.39 4 132908 135890

Neighbor

gene id symbol gene type direction distance location
CI01000177_00119283_00126859 SBNO1 coding upstream 6145 119283 ~ 126859 (+)
CI01000177_00081319_00089885 RILPL1 coding upstream 43119 81319 ~ 89885 (+)
CI01000177_00061966_00080120 NA coding upstream 52884 61966 ~ 80120 (+)
CI01000177_00050469_00056013 NA coding upstream 76822 50469 ~ 56182 (+)
CI01000177_00156585_00162274 NA coding downstream 20806 156585 ~ 162274 (+)
CI01000177_00184252_00189231 NA coding downstream 48291 184070 ~ 189619 (+)
CI01000177_00198200_00203950 PITPNM2 coding downstream 62421 198200 ~ 203950 (+)
G373782 NA non-coding upstream 64152 17574 ~ 68852 (+)
G373775 NA other upstream 22011 106764 ~ 110993 (+)

Expression


Co-expression Network