CI01000186_00111894_00116331


Basic Information

Item Value
gene id CI01000186_00111894_00116331
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 111894 ~ 116838 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000186_00111894_00116331.mRNA
GTCTGGGACTCCAGTGTTCAAGGGGAAGCAGCCTGTTGGGACATTGAGACGTCCGTTGGAGTTTCTCCCTATGTTACACGAGGTGCCGTTTTTCCAACTCATCAGGTTTGTGTCAAAAAACCCCTTTGATAAGAACACGGCATCTCCGTGTGCCACGTTGTCACATGCTGTGAGCAAATACAGCGTTGGTGAGCTCGTATCTTTCTTTCTGTTCAGCACAGCTAGCTGTGCACTACACTGTTTGAACATCATGTCAGGGCTTAATGCATCGCTGGGCTACTTCTTAGCTATAGTAGGTGTAAGTGCAGTCGGAAGGGTGCTGTTCGCTCGATGGAGGCCGCGATGGACTTTCCTGACAGAGTTCATCGCCGCCTTCGCACTCGCCGCCTGTAGGCTTGAAGTGGACACCATTGCGGAGGTCGGTCAGTGGGCCGGTGCGCTTGGGCCTGACGTGGCCATCACTATGCTTTTCCTCTCCATCACCGTTCATGCCATCATCATGCAAGGCATAAGCGGAAATCCATCGGTGACTTTAATGGAACTCCTCCAGAAAGACATCAGCGCCGTGGCGGGCGTCCTCAGCGTCGCCGCGCAGTTACTCGGTGCATACTTTGCGCTCGTAGTTGCCGGTAAGTACTGGGAGATGGAGCTGACCGACATGCACATGATCAAGAATCTGATGATGGCCGAGTGCAGTACGTCGCTGCGGGTCCCGCCACTACAGGGAGTGTTTGCTGAAGCCCTCGGCGCCATGACCTTTCACCTGGTTTACCTCGCCCTGAAGAACCGGTCACAGCTGCTGAGGATTCCCATATTCGCTCTGCTGCTGACATTCATCGCCTATGCAGGAAACAACTATACATCTGGATATGTGAATCCATCCCTCGCTTATGCCCTAACATTCACCTGTCCTGGACACACTTTCTTAGCATACTCTCTTGTCTACTGGCTCGGGCCTCTTATTGGCATGAGTCTTGCGCTCTTCCTGTATTTGGGAAACATCCCACTGCTGTTCAGCAGGAATCTACTTTACTCCAAGAAGGCACGTTTCCGGGTGCCCAAAGGGAAAACTTCTGAAGACAAGACAAACTAAGACGACTGACAGACATTAAAACCAGCACTGATATGGTCTCTTTGTAAAACAGATTTTACTGTCACAAAACATGGTTAAATGTTAAATCTGTTCGACTGGGTTAAGGTGCAGCCAGTTGCAACAAACCCCTTAAGTTACGAAAACACTTTGTCCATTACATCAGGTGTCTACTTAAATCTATCCTGTTACACAGAGTAAAAATGTTGAGTTTGTTCTAGTTGTCAGATGTGAAATTTCTACTAATATCCATGAGCCAAAGAATAGACAAGCCGGCTTAAGTTATATGGACATTTAATTTAATATATAGCAAATAATATTTAAGAGCAGGTGGCATTATACGTCAGTTGTACAATTTAGTACCTGATTGGCCGGTTTGCTAATGAAAAAAGAGACAAAGGGTAAAAAAGTAATTGCATATAAAAGTTAAAGTATGAACATTGGGATGCGTTGTGTATAAATGGCACTCATAAAACATTGCAAGTGTGCCACAATGTCACAATAGCTACA

Function

NR:

description
Zgc:92747

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000186_00111894_00116331.mRNA True 1600 mRNA 0.47 6 111894 116838

Neighbor

gene id symbol gene type direction distance location
CI01000186_00102313_00108968 PAK2 coding upstream 2027 102112 ~ 109867 (+)
CI01000186_00098106_00099994 NA coding upstream 11731 97176 ~ 100163 (+)
CI01000186_00091411_00095100 ING5, ING5A coding upstream 16356 90979 ~ 95538 (+)
CI01000186_00016608_00025920 LMNB2 coding upstream 85140 16608 ~ 26754 (+)
CI01000186_00000433_00010367 LONP1 coding upstream 101201 433 ~ 10693 (+)
CI01000186_00120791_00130397 NA coding downstream 3953 120791 ~ 130397 (+)
CI01000186_00133147_00140951 LAMB3 coding downstream 16309 133147 ~ 140951 (+)
CI01000186_00190672_00191178 NA coding downstream 73316 190154 ~ 191358 (+)
CI01000186_00192359_00208026 CACNA1S, CACNA1SA, CACNA1SB coding downstream 75521 192359 ~ 208311 (+)
CI01000186_00209162_00212762 KCTD20 coding downstream 92324 209162 ~ 213137 (+)
G378148 NA non-coding upstream 58131 53350 ~ 53763 (+)
G378147 NA non-coding upstream 58796 52874 ~ 53098 (+)
G378146 NA non-coding upstream 59047 52623 ~ 52847 (+)
G378145 NA non-coding upstream 59413 52180 ~ 52481 (+)
G378137 NA non-coding upstream 75219 36442 ~ 36675 (+)
G378184 NA non-coding downstream 36227 153065 ~ 153273 (+)
G378187 NA non-coding downstream 41501 158339 ~ 158576 (+)
G378117 NA non-coding downstream 46136 162974 ~ 165447 (+)
G378204 NA non-coding downstream 128592 245430 ~ 248174 (+)
G378213 NA non-coding downstream 200492 317330 ~ 317532 (+)
G378108 NA other upstream 98399 11415 ~ 15229 (+)
CI01000186_00413028_00415878 SFRS3, SRSF3 other downstream 294982 412601 ~ 416323 (+)
G378343 NA other downstream 777670 881526 ~ 896717 (+)

Expression


Co-expression Network