CI01000186_00215443_00223579 (STK38, STK38A, STK38B)



Basic Information


Item Value
gene id CI01000186_00215443_00223579
gene name STK38, STK38A, STK38B
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 215399 ~ 223764 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000186_00215443_00223579.mRNA
AGACAACGTGTCGAGGGAAATATTGTCCTGCAAGAGCCAAAGAAAAACTCTGAGGAACTTTATATCAGCACATGTAAATCATGTTGTGTTTGTAAACGCCTGCAGATCTGCATCCCAACCGGTTCCAGACCAGCAGTCCGGGCTGTTTCGGTAACCATGGCGACCCGAGGCCACGCCTCCAGCTCGTTAATGAGCAACCACACGAAGGAGCGAGTGACCATGGCCAAGGTCACTCTGGAGAACTTCTACAGCAACCTCATAACCCAACACGAGGAGCGTGAGATGAGGTATATAAACAGTTTTACAGCTTCACAAAGAACTTTTTATTCTCTACAGTGCATTTGCACACTCAGGCAGCAAAAACTAGAGAAGGTGATGGATGAGGAGGGACTGCCTGATGAAGAGTATATTGACACACGTGTCGTCGCAGGCTACCCTCCGTTCTGCTCAGAAACTCCTCAGGAGACCTATAAGAAGGTGATGAGCTGGAAGGAGACGCTGGTGTTTCCTCCGGAGGTGCCGATCTCGGAGCGAGCCAAAGAGCTGATCCTGCGCTTCTGCTGCGAGGCCGATCATCGCATCGGCGCGGCCGGCGTGGACGAGATCAAGAGGAACGGCTTCTTCGAGGGCGTCGATTACGATCACATCAGAGAGAGACCTGCGGCGATCCCCATCGAGATCAAAAGCATCGACGACACGTCAAACTTCGACGAGTTTCCGGAGTCGGACATCCTGCAGCCGACAAGTCCGGCGGTGGCGAGCAACCATCACCCGGAGTCGGACTATAAGAATAAGGACTGGGTTTTCATCAACTACACATACAAGCGCTTCGAGGGTCTGACGGCCAGAGGAGCCATACCGTCCTACATGAAGAGCGGGAAAAGATGAATACTGGAGCGGACGGCAGGTATTCAGGGCCGTGTGGAAAGAAA

Function


symbol description
stk38a Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Orthologous to human STK38 (serine/threonine kinase 38).
stk38b Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Orthologous to human STK38 (serine/threonine kinase 38).
stk38 Enables several functions, including ATP binding activity; magnesium ion binding activity; and mitogen-activated protein kinase kinase kinase binding activity. Involved in intracellular signal transduction; negative regulation of MAP kinase activity; and protein phosphorylation. Located in cytosol and nucleus.

NR:

description
Zgc:55572 protein

GO:

id name namespace
GO:0018105 peptidyl-serine phosphorylation biological_process

KEGG:

id description
K08790 STK38, NDR; serine/threonine kinase 38

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000186_00215443_00223579.mRNA False 932 mRNA 0.53 6 215399 223579
Loading

Neighbor


gene id symbol gene type direction distance location
CI01000186_00175457_00185420 NA coding downstream 29979 175199 ~ 185420 (-)
CI01000186_00165206_00167364 PPARDB, PPARD, PPARB, PPARDA coding downstream 47940 165042 ~ 167459 (-)
CI01000186_00156270_00161766 NA coding downstream 53633 156183 ~ 161766 (-)
CI01000186_00144110_00151887 CAMK1GA coding downstream 63512 143662 ~ 151887 (-)
CI01000186_00095947_00097088 CEP19 coding downstream 118257 95645 ~ 97142 (-)
CI01000186_00238503_00238674 NA coding upstream 14891 237138 ~ 238674 (-)
CI01000186_00240507_00248051 DENND2DB coding upstream 16750 240329 ~ 248084 (-)
CI01000186_00259516_00260745 NA coding upstream 35837 259416 ~ 261189 (-)
CI01000186_00261713_00270433 CRY1BB coding upstream 37844 261423 ~ 270510 (-)
CI01000186_00281889_00289711 NA coding upstream 57333 280912 ~ 290480 (-)
G378456 NA non-coding downstream 95231 119741 ~ 120168 (-)
G378457 NA non-coding downstream 97080 117796 ~ 118319 (-)
G378455 NA non-coding downstream 98529 114368 ~ 116870 (-)
G378454 NA non-coding downstream 102512 112664 ~ 112887 (-)
G378453 NA non-coding downstream 103903 111292 ~ 111496 (-)
G378399 NA non-coding upstream 13559 240855 ~ 241071 (-)
G378480 NA non-coding upstream 77307 300886 ~ 301234 (-)
G378481 NA non-coding upstream 78632 302211 ~ 302489 (-)
G378482 NA non-coding upstream 98950 322529 ~ 322781 (-)
G378517 NA non-coding upstream 220809 444388 ~ 444877 (-)
G378466 NA other downstream 21639 192170 ~ 193760 (-)
G378458 NA other downstream 93974 120682 ~ 121425 (-)
CI01000186_00360860_00361637 NA other upstream 137331 360640 ~ 366991 (-)
G378509 NA other upstream 172679 396258 ~ 396755 (-)
CI01000186_00485805_00522951 CELSR2 other upstream 262217 485796 ~ 523767 (-)
G378476 NA non-coding downstream 1433 215782 ~ 216043 (-)

Expression


CI01000186_00215443_00223579(STK38, STK38A, STK38B) Expression in PRJCA010000

Bar chart with 27 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
End of interactive chart.

CI01000186_00215443_00223579(STK38, STK38A, STK38B) Expression in each Bioproject

Bar chart with 43 bars.
CI01000186_00215443_00223579(STK38, STK38A, STK38B) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network