CI01000186_00238503_00238674



Basic Information


Item Value
gene id CI01000186_00238503_00238674
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 237138 ~ 238674 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000186_00238503_00238674.mRNA
GGTTCTTTCATCGGAAGGTGTCGGAGTATCACGAGCGGAGGAAGAAGGAGAAGACGAAGGCCGGGTGGGTGCGAGGTGTCGTGGTGTAAGAGCTTCAGAGTGTTCTAGTGTTCATTCACGGTTACGCTTTTCCCAGAAGCATTTTATCAGACAATCAGTGGTGAATATTTAATGCTGTTTATTTGTATTGTTTTAATGTAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000186_00238503_00238674.mRNA False 205 mRNA 0.43 1 238470 238674

Neighbor


gene id symbol gene type direction distance location
CI01000186_00215443_00223579 STK38, STK38A, STK38B coding downstream 14891 215399 ~ 223764 (-)
CI01000186_00175457_00185420 NA coding downstream 53050 175199 ~ 185420 (-)
CI01000186_00165206_00167364 PPARDB, PPARD, PPARB, PPARDA coding downstream 71011 165042 ~ 167459 (-)
CI01000186_00156270_00161766 NA coding downstream 76704 156183 ~ 161766 (-)
CI01000186_00144110_00151887 CAMK1GA coding downstream 86583 143662 ~ 151887 (-)
CI01000186_00240507_00248051 DENND2DB coding upstream 1655 240329 ~ 248084 (-)
CI01000186_00259516_00260745 NA coding upstream 20742 259416 ~ 261189 (-)
CI01000186_00261713_00270433 CRY1BB coding upstream 22749 261423 ~ 270510 (-)
CI01000186_00281889_00289711 NA coding upstream 42238 280912 ~ 290480 (-)
CI01000186_00304422_00316712 ZNF76 coding upstream 65644 304318 ~ 316863 (-)
G378476 NA non-coding downstream 22427 215782 ~ 216043 (-)
G378456 NA non-coding downstream 118302 119741 ~ 120168 (-)
G378457 NA non-coding downstream 120151 117796 ~ 118319 (-)
G378455 NA non-coding downstream 121600 114368 ~ 116870 (-)
G378454 NA non-coding downstream 125583 112664 ~ 112887 (-)
G378480 NA non-coding upstream 62212 300886 ~ 301234 (-)
G378481 NA non-coding upstream 63537 302211 ~ 302489 (-)
G378482 NA non-coding upstream 83855 322529 ~ 322781 (-)
G378517 NA non-coding upstream 205714 444388 ~ 444877 (-)
G378520 NA non-coding upstream 209435 448109 ~ 448422 (-)
G378466 NA other downstream 44710 192170 ~ 193760 (-)
G378458 NA other downstream 117045 120682 ~ 121425 (-)
CI01000186_00360860_00361637 NA other upstream 122236 360640 ~ 366991 (-)
G378509 NA other upstream 157584 396258 ~ 396755 (-)
CI01000186_00485805_00522951 CELSR2 other upstream 247122 485796 ~ 523767 (-)

Expression



Co-expression Network