CI01000186_00259516_00260745


Basic Information

Item Value
gene id CI01000186_00259516_00260745
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 259416 ~ 261189 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000186_00259516_00260745.mRNA
AGATTCACACTCAAAGGAGCTGATTCAGTTCATATTCAAAGGAGCTGATTCAGTTCATATTCACACTCAAATGAATTGAATCAGTTTAGATTCACACTCAAAGGAGCTGATTCAGTTCATATATTCACACTCAAATGAACTGATTCAGTTCATATTCATATTCAAAGGAGCTGATTCAGTTCATATTCACACTTAAAGGAGCTGATTCAGTTCATATTCACACTCAAATGAACTGATTCAGTTCATATTTACACAAAGGAGCTGATTCAGTTCATATTTACACTCAAATGAACTGATTCAGTTCATATTCACACTCAAATGAACTGATTCAGTTCATATTCACACCTAAAGGAGCTGATTCAGTTCATATTCACACTCAAATGAACTGAATCAGTTCAGATTCACGCTCAAATAACCTGATTCAGTTCAGATTTATACTCAAAAATGCTGATTCAGTTCAGATTCACACTCAGAGGAGCTGATTGTTCAGTTCTGAATTCTGCTCAAGCTTCAATTTTATCTCTTGACGTCTGTATGTTTGTGTTTGTGCACCTCTGGGCGCAGCTGGGTTTCCCAGGATTCCCTGCTGCCGCGTGGAGGTTTTGTTTTGGTTTTGTGAAGTTTGTGATGAGACGCTGCGGGTTAATCTCTCCCTCTGATTCCAGACGTTACTTACCTGTCCTCCGAGATTTTCCAGCCAAGTTCATCTACGACCCCTGGAACGCGCCGGAAGATGTGCAGCTCGCCGCCAAATGCGTGATCGGAGTGGACTATCCCAAACCGATGGTGAACCACGCGGAGGCCAGTCGCCTGAACATCGAGAGGATGAGGCAGATCTACCAGCAGCTGTCCAGATACCGCGGACTCAGTAAGAGCGCGTTCAACCTCACCGTTTACAAAGTTCTCCATTTTCTCCTTCTCATTTTCGTTCAACCCTCAGGTCTTCTCGCCACCGTTCCGTCCAACCACATGGAGGATGTGAGTGTAAATGAAGCCCGAGGGTCAGCAGTGCCCCGGAGGATGCAGAGCAGCGTGACGTCTCACCGGGTCAGGAGAGAGCAGTCCAGACCGGCCGGAGCGAAACATCGTGGCGCGAGATACCGACACTCCCTTGGCCACCGTACGTCGCCCTACACCGCCCAGAGTGACCTGACGAACCACGGCCATGAGTTTGCCGTCCCACAACAACCGGAAGAGGCGGGAAGATGCTGAGGGCGTGGCCTCCTCATCCTAAGCCCCACCCACTGATGGATTCGTAAAATGTATCGTAAATTTCCTCACGTGTTAAACACTAACATTCAGAGTAATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000186_00259516_00260745.mRNA True 1312 mRNA 0.47 4 259416 261189

Neighbor

gene id symbol gene type direction distance location
CI01000186_00240507_00248051 DENND2DB coding downstream 11365 240329 ~ 248084 (-)
CI01000186_00238503_00238674 NA coding downstream 20742 237138 ~ 238674 (-)
CI01000186_00215443_00223579 STK38, STK38A, STK38B coding downstream 35837 215399 ~ 223764 (-)
CI01000186_00175457_00185420 NA coding downstream 73996 175199 ~ 185420 (-)
CI01000186_00165206_00167364 PPARDB, PPARD, PPARB, PPARDA coding downstream 91957 165042 ~ 167459 (-)
CI01000186_00261713_00270433 CRY1BB coding upstream 234 261423 ~ 270510 (-)
CI01000186_00281889_00289711 NA coding upstream 19723 280912 ~ 290480 (-)
CI01000186_00304422_00316712 ZNF76 coding upstream 43129 304318 ~ 316863 (-)
CI01000186_00318098_00318475 NA coding upstream 56539 317728 ~ 318475 (-)
CI01000186_00340443_00342720 ELF3 coding upstream 79082 340271 ~ 342966 (-)
G378399 NA non-coding downstream 18345 240855 ~ 241071 (-)
G378476 NA non-coding downstream 43373 215782 ~ 216043 (-)
G378456 NA non-coding downstream 139248 119741 ~ 120168 (-)
G378457 NA non-coding downstream 141097 117796 ~ 118319 (-)
G378455 NA non-coding downstream 142546 114368 ~ 116870 (-)
G378480 NA non-coding upstream 39697 300886 ~ 301234 (-)
G378481 NA non-coding upstream 41022 302211 ~ 302489 (-)
G378482 NA non-coding upstream 61340 322529 ~ 322781 (-)
G378517 NA non-coding upstream 183199 444388 ~ 444877 (-)
G378520 NA non-coding upstream 186920 448109 ~ 448422 (-)
G378466 NA other downstream 65656 192170 ~ 193760 (-)
G378458 NA other downstream 137991 120682 ~ 121425 (-)
CI01000186_00360860_00361637 NA other upstream 99721 360640 ~ 366991 (-)
G378509 NA other upstream 135069 396258 ~ 396755 (-)
CI01000186_00485805_00522951 CELSR2 other upstream 224607 485796 ~ 523767 (-)

Expression


Co-expression Network