CI01000186_00318098_00318475


Basic Information

Item Value
gene id CI01000186_00318098_00318475
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 317728 ~ 318475 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000186_00318098_00318475.mRNA
CGCAGCGTCAGTCACGCGACCCGTTACTCGACCGAGGCCTGTAATAAAACGAGAGGCAGGAAAGGCTTCATTACCGCAATCACGTTGACGAATGTGGTTTTCCCCGAGTACTGCAGGCCGACGAGCGTCAGCTCCATCTCCTCCTTCCAGAACAAGGCCTTGAACCAGTCCAGCAGCTTGTTGAATAACGCGATCATGGTGCGGGTTCGGCTGCGGGGCTCGTGCTGTCGTGGTCCGGATCTGCTGCTCACGGCTCGTCCTTCCTCATTGGGTGGGGTTTCACATCCACGCACAGCTGATCCAAACAATGCGGGACACGGGCATGCGCGCTCTCGCTCCTCGCAGCGCGCGCGCCCCCTGCTGGAGAGATGCCGGTGACGTCATCGTTTGTTTTTAATTCAGATGTCAAATAACACGGTTAAAATATAGCATTATTATAAACTCAGAGCACAAAATATGATCTATAAATAATTTTAAAATAGACCGGATGCCTTCCAGTAACTAGATTAGATAAACATGAACTATATTGAAAAATTAACATTCTCTAATAATTATTTCTTTAGATAAATATAAAACACTTACAATTAATGGATGAAAATCTCTCTCTCAAGAAAAAAGCAATGCTGTATGACAAGTTTAGTGTGTGTATGATGCCTGCTACAAAATATATTCAATAATTAATTATACATGCATTGTATAACTGAAATATATGTATATAGGCCTATAAAAATATGAAAAACAAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000186_00318098_00318475.mRNA True 748 mRNA 0.43 1 317728 318475

Neighbor

gene id symbol gene type direction distance location
CI01000186_00304422_00316712 ZNF76 coding downstream 865 304318 ~ 316863 (-)
CI01000186_00281889_00289711 NA coding downstream 27248 280912 ~ 290480 (-)
CI01000186_00261713_00270433 CRY1BB coding downstream 47218 261423 ~ 270510 (-)
CI01000186_00259516_00260745 NA coding downstream 56539 259416 ~ 261189 (-)
CI01000186_00240507_00248051 DENND2DB coding downstream 69677 240329 ~ 248084 (-)
CI01000186_00340443_00342720 ELF3 coding upstream 21796 340271 ~ 342966 (-)
CI01000186_00360860_00361637 NA coding upstream 42165 360640 ~ 366991 (-)
CI01000186_00408656_00408943 NA coding upstream 89660 408135 ~ 408943 (-)
CI01000186_00433415_00435816 USP49 coding upstream 114358 432833 ~ 435994 (-)
CI01000186_00453106_00464818 NUAK2 coding upstream 133617 452092 ~ 464818 (-)
G378481 NA non-coding downstream 15239 302211 ~ 302489 (-)
G378480 NA non-coding downstream 16494 300886 ~ 301234 (-)
G378399 NA non-coding downstream 76657 240855 ~ 241071 (-)
G378476 NA non-coding downstream 101685 215782 ~ 216043 (-)
G378456 NA non-coding downstream 197560 119741 ~ 120168 (-)
G378482 NA non-coding upstream 4054 322529 ~ 322781 (-)
G378517 NA non-coding upstream 125913 444388 ~ 444877 (-)
G378520 NA non-coding upstream 129634 448109 ~ 448422 (-)
G378522 NA non-coding upstream 132561 451036 ~ 451418 (-)
G378539 NA non-coding upstream 217231 535706 ~ 535908 (-)
CI01000186_00215443_00223579 STK38, STK38A, STK38B other downstream 93964 215399 ~ 223764 (-)
G378466 NA other downstream 123968 192170 ~ 193760 (-)
G378458 NA other downstream 196303 120682 ~ 121425 (-)
G378509 NA other upstream 77783 396258 ~ 396755 (-)
CI01000186_00485805_00522951 CELSR2 other upstream 167321 485796 ~ 523767 (-)

Expression


Co-expression Network