CI01000186_00408656_00408943


Basic Information

Item Value
gene id CI01000186_00408656_00408943
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 408135 ~ 408943 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000186_00408656_00408943.mRNA
ATGACTTATCCTCTCTGCAGCAGACGGGCGGTCACGGAGCATCAGTTGATGCATGATCGCGGTCGCTCCATTCAGAGCCTGAAGAGACTGATCTGGCTGTCCAGTGCGATCGAGGGGCTTCACACCGCACAGACCCGCACACTGACCACCGACGAGCCGGACAGCAGGTGGCGCTTTCGCGGTCCTCAGCCTGGTAAAGAGAGCAGCAGCCACAAGAGGGCGCTAGAGACGCTGTTGAGCGACATGTACAGACCTCACCTCACTGCTGGACTGGACGGAGAGAAATAGCGCCATACGAACACCATTCTGATTCCCCGGGAAAACTTACCAATGACAGTCCGACCACGTCTATAATGAGACTGACTGGCGAAACGCTGATGAACAAAACTAGATTGCTGCCTTTATAATCAACAAAGTTGCATTACAGACGAAACTAGGATAGTTATTGATTAGAATGTAAGCGATCTAGTTTTGGCGCGTTTCTCCCTCTGCGCAGACGCAGAGCGGCTCATCCGTGATCTTCACCTGCATTCTGTATAAATCTGCCTGTAAGAAATATAGAATCAGTTTAGAGTATTTCATGGTGCTTTGAAATACACCGCGTGCAATCGCATTACCATGGTCTTCACTAATCACCTTAGTACACGTCCAAAAACATGTTAAAGAAATACCATGGTGTTTTTGTTTTGTAAGTGTTGATTTATTTATGAGCAGAGGACGTGTTGGATGGGTTTCAAATCATCCTTGCTATACATGGATGGCTATAAACAGATCGTATTTTTGATTTATTATGTATGTGTGTGATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000186_00408656_00408943.mRNA True 809 mRNA 0.46 1 408135 408943

Neighbor

gene id symbol gene type direction distance location
CI01000186_00360860_00361637 NA coding downstream 45435 360640 ~ 366991 (-)
CI01000186_00340443_00342720 ELF3 coding downstream 65169 340271 ~ 342966 (-)
CI01000186_00318098_00318475 NA coding downstream 89660 317728 ~ 318475 (-)
CI01000186_00304422_00316712 ZNF76 coding downstream 91272 304318 ~ 316863 (-)
CI01000186_00281889_00289711 NA coding downstream 117655 280912 ~ 290480 (-)
CI01000186_00433415_00435816 USP49 coding upstream 23890 432833 ~ 435994 (-)
CI01000186_00453106_00464818 NUAK2 coding upstream 43149 452092 ~ 464818 (-)
CI01000186_00485805_00522951 CELSR2 coding upstream 76862 485796 ~ 523767 (-)
CI01000186_00525649_00532282 CAPZB, CAPZB.L coding upstream 116613 525556 ~ 532353 (-)
CI01000186_00588218_00590230 ORA4 coding upstream 179275 588218 ~ 590804 (-)
G378482 NA non-coding downstream 85354 322529 ~ 322781 (-)
G378481 NA non-coding downstream 105646 302211 ~ 302489 (-)
G378480 NA non-coding downstream 106901 300886 ~ 301234 (-)
G378399 NA non-coding downstream 167064 240855 ~ 241071 (-)
G378476 NA non-coding downstream 192092 215782 ~ 216043 (-)
G378517 NA non-coding upstream 35445 444388 ~ 444877 (-)
G378520 NA non-coding upstream 39166 448109 ~ 448422 (-)
G378522 NA non-coding upstream 42093 451036 ~ 451418 (-)
G378539 NA non-coding upstream 126763 535706 ~ 535908 (-)
G378540 NA non-coding upstream 127250 536193 ~ 536507 (-)
G378509 NA other downstream 11380 396258 ~ 396755 (-)
CI01000186_00240507_00248051 DENND2DB other downstream 160051 240329 ~ 248084 (-)
CI01000186_00215443_00223579 STK38, STK38A, STK38B other downstream 184371 215399 ~ 223764 (-)
G378466 NA other downstream 214375 192170 ~ 193760 (-)

Expression


Co-expression Network