CI01000186_00420359_00420723


Basic Information

Item Value
gene id CI01000186_00420359_00420723
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 420359 ~ 421445 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000186_00420359_00420723.mRNA
GAAAGGGAAATAAACACTTAAAACAAATAGCAGCACACTCTCGTGTAAAAATAGCGCGTCTGTACTGGGCGGATCCGCTCAGTTCGGGAGGTTCTGTTCTTCTCTGTGACGCAGATCTACTGGAATGTCCTGATGAAGGCGCGTTCACGCTGCACACGCGCTCACGTGTTGTCATGTGTTTACCGGGCTCAGTCCACGTGCAGTTTCCACCAGGCCCCGCCCACCGTCTGGACACGCCTATCGGAGTTCATAAAGTTCAGAAAGTCCCTTCAGCGCTAGAAGAACAGCTCGAATCTAGCGAACTCTCGCCAGGATTGAGTTACTCGACACTTTCACCCAAAGGCACTGCTAAAGTTCACTTTTAAACTCTATACTGCTGTGCAGGACATCTGAAACCTCTCAAGTTTACTCAGCAAACAGCCATTTTACCACTTTTTAACTCTCCTCAGAAGACAAATCATGTAAGTTGCATGTTTTTCATCGTTTTGCACGTTCATAGCGTTTGATTTCAAGTTGTGTTTATCACAAAGTGTTTATGAAGTTGATTATCATTTATCACAAGAGCATTATGCAAACTAATAACAAAAATAGTTAAAACTCTCTTGGCTCTTTTAAATAACAATCAAGTAATATAAACATCTCAGACGAACTTTAACTGAAAACTTTCCCCTGACACTTAAATATAGATCATTATGGCTCGTGATTGATTGATTTTTATCGCTGTTTGAATGTTATTGTGAAGTGAAATGTCACAGTCGTGTCTGATCGCGACCTGTTTTCCACCGGCATACACGAGATTCGTGTTCACGTGGACCGAGAGCACAGAGTGGGCGTGTCTGTGTCACTTCTGACCAATCAAACAAACGTTCGCTTTCCCGCCGCTGTCTTGAATTTTTTTTCCCAGTAATGAACGGCACGTTCCATCACATAAACCAATAGGAACTCAGAAGAACTGTAGTGACCGAAATCAGTGCCATGACATCATGAATGATAGAAATATATTTTAAATAAAATATGAATAAAAACTAATTATATGTATGAGAAATCTTTGACAAATCATTTTATATCACATTGATATATTGACTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000186_00420359_00420723.mRNA True 1087 mRNA 0.41 1 420359 421445

Neighbor

gene id symbol gene type direction distance location
CI01000186_00413028_00415878 SFRS3, SRSF3 coding upstream 4056 412601 ~ 416323 (+)
CI01000186_00402892_00406010 APOBEC2A coding upstream 14226 402892 ~ 406133 (+)
CI01000186_00295882_00296578 BTG2 coding upstream 123408 295669 ~ 296951 (+)
CI01000186_00272056_00278805 RBBP5 coding upstream 141182 271668 ~ 279177 (+)
CI01000186_00252556_00256882 NA coding upstream 163090 252556 ~ 257269 (+)
CI01000186_00422121_00422913 NA coding downstream 637 422082 ~ 424110 (+)
CI01000186_00427652_00430661 TMCC2 coding downstream 6207 427652 ~ 431316 (+)
CI01000186_00444836_00447109 BYSL coding downstream 23339 444784 ~ 447234 (+)
CI01000186_00447837_00449357 NA coding downstream 26392 447837 ~ 449357 (+)
CI01000186_00466293_00479755 DSTYK coding downstream 44848 466293 ~ 479991 (+)
G378208 NA non-coding upstream 100237 318162 ~ 320122 (+)
G378213 NA non-coding upstream 102827 317330 ~ 317532 (+)
G378204 NA non-coding upstream 172185 245430 ~ 248174 (+)
G378117 NA non-coding upstream 254912 162974 ~ 165447 (+)
G378187 NA non-coding upstream 261783 158339 ~ 158576 (+)
G378300 NA non-coding downstream 67357 488802 ~ 492677 (+)
G378322 NA non-coding downstream 144551 565996 ~ 566341 (+)
CI01000186_00567272_00571417 NA non-coding downstream 145517 566929 ~ 571768 (+)
G378325 NA non-coding downstream 215573 637018 ~ 637549 (+)
G378327 NA non-coding downstream 228367 649812 ~ 650154 (+)
G378108 NA other upstream 406864 11415 ~ 15229 (+)
G378343 NA other downstream 473063 881526 ~ 896717 (+)

Expression


Co-expression Network