CI01000186_00567272_00571417


Basic Information

Item Value
gene id CI01000186_00567272_00571417
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 566929 ~ 571768 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000186_00567272_00571417.mRNA
ATATAAAGGAAAGTGCGCGCGCTTTCAGTGTAGCTTCACATCTTTATTGATTATAACGCGTTGTGTCGCGTCGCACGCCTGCAGTAGACGCGCTGTCAGGAGTCGTGCCTAGACATGGCAGAAGTGCCTTCATCAGCCGCGGTGAGAGGGCGGGAACGCGCTCATTTCTGAGGAGGGTTTAAACGGTGACTGATAAATCTGAGGAGATTTCCGCCAACAAACTCAAAAAAAAAATGTAGTTAAACTTTTATCGATGGCGCGTGGTGGGTGGACTGAGTTAAATAAATACTGTCCTTATTAACAGGTTCGTGTCAACCTTCTTTAGTCTGAAGTCCTTTCTCAAATGGACCCGCTCCGCTTCGTCAGGCTGCTGGCGCTGTGCGCGTGCCTGTGGCCAACCTGCACGCGCGGCTCAGATCTGATCCGTGCCGAGCGTCTGCAGGTGCGTGACCTTCGCTCCAGAAGTGCTGTTCTGCAGTGGCGGCCGGTGCTCAGCGGAGGTCTGGGAAACTACAGCCTTCACTACAAGCCCGACCCGTCAGACGGCACGGCAGCATCCATCAGCATCGGCCCCGGCAGTAATCTCACTCTTCCAGGCGACTTCAGCTGGGCCGAACTCACCAACCTGCAGCCCGACACCAGCTACACGGCCTGGCTCGTTCCCGAGAACAACATTCGCTACATGAAAACGCTCAGCGTGAGCTTCAGGACCCTGCCCGAGCGGTTCGGTCCGGCGACCGTGATGGTGTCGGATTCGGGTCCGGATGGCTTGCGTGTGAGCTGGAGTCCGGTCCAGCCTGAGCAGGTCCAGCAGTACCGCGTGGAGTACGGAGAGATTCCCATCGGTCCGGTCCGGAATGTGACCCTGCCCTCCTACCAGAGCTCCGCCCTCCTCACTCAGCTCCTCCCAGACACTGAGTACCTGATCACCGTCACTGCGCTGCACTCCTCCGGCCAGCAGAGGGCGATGTCTGTCCGAGGCTGCACACGAGAAGATCTCCCGCCGCTCGCTGACCTGAAGTTGACCCCTGTGGGGCGGGGCTCGGTGCAGGTTGATTGGCAGGGACAGGGGGCGGGGCTTCTGGGCTACTGGGTGAGCTGGAAGAGAGAAGATCAGCCTTCGTCTTCCTCTTCCTCGCTGTTCCTGCCGCCACACTCACTGTCCACACGGCTGACGGAGCTGGGCCGCGGCAGCCGCGTGTGTGTGTCGCCGGTGTACCTCAGCGCGCGCGGGGAGGGGCTCTGCTGCACGGCGCACGCTTAAACTGACCCGAGCTCAGTGTTTAAAGAACTTTCAGAACAGGGTTTCTCTGACAACTGCACAGGAAGTGGATTCCAAACTGAACTGACTGTCCTTACGCAGCTGAAACTGTTCCTCTGGCTAACAAAAATAATAATTCAAATAAGTGTAAGAAATTCATGATTGACCTCATGCAGTCACATCCTGACACCTGAAAGCTGATTACACAATGTGTTTCTGTGTTAGATCTGTGTGTTGTGAGTCATAGTTTATGTGTGTTTACTGCCACCTAGCGAGCGTAAAACAACATCATCACACTGAACTTTCCCGCTGGATTGATTATGACGGAGATGAACTGCAATATTAGAACTGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000186_00567272_00571417.mRNA False 1615 mRNA 0.56 4 566929 571768

Neighbor

gene id symbol gene type direction distance location
CI01000186_00542490_00549351 NBL1 coding upstream 17324 542490 ~ 549605 (+)
CI01000186_00466293_00479755 DSTYK coding upstream 86938 466293 ~ 479991 (+)
CI01000186_00447837_00449357 NA coding upstream 117572 447837 ~ 449357 (+)
CI01000186_00444836_00447109 BYSL coding upstream 119695 444784 ~ 447234 (+)
CI01000186_00427652_00430661 TMCC2 coding upstream 135613 427652 ~ 431316 (+)
CI01000186_00572513_00575244 CCNL2 coding downstream 745 572513 ~ 575315 (+)
CI01000186_00576917_00577699 NA coding downstream 5149 576917 ~ 577818 (+)
CI01000186_00578242_00581296 CCNL2 coding downstream 6348 578116 ~ 581373 (+)
CI01000186_00584169_00586048 ORA3 coding downstream 12256 584024 ~ 586058 (+)
CI01000186_00592130_00592897 FNDC10 coding downstream 20086 591854 ~ 592899 (+)
G378322 NA non-coding upstream 588 565996 ~ 566341 (+)
G378300 NA non-coding upstream 74252 488802 ~ 492677 (+)
G378208 NA non-coding upstream 246807 318162 ~ 320122 (+)
G378213 NA non-coding upstream 249397 317330 ~ 317532 (+)
G378204 NA non-coding upstream 318755 245430 ~ 248174 (+)
G378325 NA non-coding downstream 65250 637018 ~ 637549 (+)
G378327 NA non-coding downstream 78044 649812 ~ 650154 (+)
G378350 NA non-coding downstream 180361 752129 ~ 752425 (+)
G378351 NA non-coding downstream 181741 753509 ~ 753729 (+)
G378352 NA non-coding downstream 182224 753992 ~ 754221 (+)
CI01000186_00413028_00415878 SFRS3, SRSF3 other upstream 150606 412601 ~ 416323 (+)
G378108 NA other upstream 553434 11415 ~ 15229 (+)
G378343 NA other downstream 322740 881526 ~ 896717 (+)

Expression


Co-expression Network