CI01000186_00576917_00577699


Basic Information

Item Value
gene id CI01000186_00576917_00577699
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 576917 ~ 577818 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000186_00576917_00577699.mRNA
ATCCCTCTGCCTGACCAGCCGCCCTGGTTCTCGTTGTTCGGGGCGTCAGAACAGGACCTGATTGAGATCAGCTGCTGTATCCTGCGGCTGTACACACTGCGGTGCGAGTCGCTGACGGCACTGCAGCAGCAGGTGGAGGAATCGCGTTTAAAGTTGGACGCTCAACACTACACGAGTAAACCAGGAGGACTCTCGTCCGCGACCGACACCCCGACACGTGATCCGGCCGCCGGTTTCTCTCCTGCGTCTAAAGCTGCGTCTCCTGCAGAAAACCAGAAGAATCACGAATCTCCGCTGTCACATCTCACTCTCAAAAACGTCTGTCGAAAGATCACCAGCCGAGAAGGGCGCAGTCGTAGCGTGTCCTCTCCATCGCGGTCTGTTTCTCCTGGACGCTCGAAGTCCTACAGACACCGGCAGAGGGAACGCGAACGAGAGCAGAGAAAGGGACGTTCATCTCACAGGAGATGATGTCATCAGGTGTGGGGGGGAGTGGCCCAAAACTGACCAATCAGATGAAACCGCTTATATAGATCTAAACTGCCTTGAACAAAGTATTTTGTATTGTGTATTTTTGAATCTATTTTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000186_00576917_00577699.mRNA True 590 mRNA 0.53 3 576917 577818

Neighbor

gene id symbol gene type direction distance location
CI01000186_00572513_00575244 CCNL2 coding upstream 1602 572513 ~ 575315 (+)
CI01000186_00567272_00571417 NA coding upstream 5149 566929 ~ 571768 (+)
CI01000186_00542490_00549351 NBL1 coding upstream 27312 542490 ~ 549605 (+)
CI01000186_00466293_00479755 DSTYK coding upstream 96926 466293 ~ 479991 (+)
CI01000186_00447837_00449357 NA coding upstream 127560 447837 ~ 449357 (+)
CI01000186_00578242_00581296 CCNL2 coding downstream 298 578116 ~ 581373 (+)
CI01000186_00584169_00586048 ORA3 coding downstream 6206 584024 ~ 586058 (+)
CI01000186_00592130_00592897 FNDC10 coding downstream 14036 591854 ~ 592899 (+)
CI01000186_00597558_00603062 SSU72L, SSU72 coding downstream 19740 597558 ~ 603387 (+)
CI01000186_00606096_00608919 TMEM240B coding downstream 28278 606096 ~ 609198 (+)
G378322 NA non-coding upstream 10576 565996 ~ 566341 (+)
G378300 NA non-coding upstream 84240 488802 ~ 492677 (+)
G378208 NA non-coding upstream 256795 318162 ~ 320122 (+)
G378213 NA non-coding upstream 259385 317330 ~ 317532 (+)
G378325 NA non-coding downstream 59200 637018 ~ 637549 (+)
G378327 NA non-coding downstream 71994 649812 ~ 650154 (+)
G378350 NA non-coding downstream 174311 752129 ~ 752425 (+)
G378351 NA non-coding downstream 175691 753509 ~ 753729 (+)
G378352 NA non-coding downstream 176174 753992 ~ 754221 (+)
CI01000186_00413028_00415878 SFRS3, SRSF3 other upstream 160594 412601 ~ 416323 (+)
G378108 NA other upstream 563422 11415 ~ 15229 (+)
G378343 NA other downstream 316690 881526 ~ 896717 (+)

Expression


Co-expression Network