CI01000186_00584169_00586048 (ORA3)


Basic Information

Item Value
gene id CI01000186_00584169_00586048
gene name ORA3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 584024 ~ 586058 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000186_00584169_00586048.mRNA
CCATAAAAGGGGCTTGCGGTCGGTGGGTGGAGAGGGAGGCGTTGGGATGGAGATATTACAACATCACTGAGGCGTTCTGAGAGAAGCTCCATTTATGATTGAAGTCTGAAGAAGCTTGAACTCTCGATTGGCGATCAGAAGAAACATGGCCCCTCAAAGAAAACCCTCAAGCGTCAGTCAGCGTATCGCTTCATCTCCTTTCTACTTCGCCCTCTACGTCATTCTGGTGCTGCTGGGGAACGTGGGCAACACCACGGTCATCGGAGTGGTCGGCGAAAGCCTTCTGCGAGAGACGGGAGTCGTCCGAAGCTCTGACGTGATCCTGGTCAACATGGCTTTCTCCAACCTGATGGTGTCGTTGGTGAGAAACACGGTCGTGATGGTGTCCGACCTGGGAGTGGAGGTACGGCAGAATTACCACATGGAAGGACGTCTGGTTGGATGGATGACTGTTAATGAATGGATAGATGTTGAGATTTTCCTCTCTAGAGACATGTGTCACCTTATGATGGGCATCTGGGTTTGGCTCCGCTCCGCAAACGTTTGGTCGACGTTCTTTCTGAGTGCGTTCCACTTTCAAACGCTGCGTCGGGTCGCCCCGCCCGTCATCAGCCTGCACGGCCCCCGCGGGCCCCCCAGATCCCTCATCCTCGGCTTCGGCCTCATCTGGAGCCTCAATCTGATCTACGCCATCCCAGCGTTCATCTTCTCCAAGAATGGAGACGAGAACTCCACCGAGACGCTGATGCTGGTCAGCAGCACCACTCGGCCGCTGATGGGCTGCATCTGGGACTTTCCATCAGCCTACAGCGGCCTGGCCTTCGCCACCTCCTCCATGGTGATCCATGAGTCCATTCCCATCTGCCTGATGAACATCACCAACCTGGGCTCCCTGTTGACGCTGTACGCTCACGGACACACGCGGAACGCCGCCAACAAGAGTCAGGACGCACCGGTCGTCACCCGGATCCCCGCGGAGCGACGGGCGGCTAAAGTGATTCTGGCGCTCAATATCCTCTTCATTTCTTCTTGGGGAACTAACGTCATCTCGGTCAACTACTTCAACTATAACCGCGGATCTTCCACAGAGTTCCTGCTCATCATCGCTCGCTTCGCCAACATGAGCTTCATCGCGCTGTCGCCCATCGTCCTCGCCGTGGGACACCGGAGACTCCGAGCCTTTATAAAGTCAATCCTGTCGCATCTCTATCCGTTTGGATAGACTTCAGACA

Function

symbol description
ora3 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and sensory perception of taste. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in liver; olfactory epithelium; and olfactory receptor cell.

NR:

description
vomeronasal type 1 receptor 3

GO:

id name namespace
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000186_00584169_00586048.mRNA True 1232 mRNA 0.56 4 584024 586058

Neighbor

gene id symbol gene type direction distance location
CI01000186_00578242_00581296 CCNL2 coding upstream 2651 578116 ~ 581373 (+)
CI01000186_00576917_00577699 NA coding upstream 6206 576917 ~ 577818 (+)
CI01000186_00572513_00575244 CCNL2 coding upstream 8709 572513 ~ 575315 (+)
CI01000186_00567272_00571417 NA coding upstream 12256 566929 ~ 571768 (+)
CI01000186_00542490_00549351 NBL1 coding upstream 34419 542490 ~ 549605 (+)
CI01000186_00592130_00592897 FNDC10 coding downstream 5796 591854 ~ 592899 (+)
CI01000186_00597558_00603062 SSU72L, SSU72 coding downstream 11500 597558 ~ 603387 (+)
CI01000186_00606096_00608919 TMEM240B coding downstream 20038 606096 ~ 609198 (+)
CI01000186_00611336_00614260 NA coding downstream 25278 611336 ~ 614580 (+)
CI01000186_00620849_00622738 CROCC coding downstream 34791 620849 ~ 622738 (+)
G378322 NA non-coding upstream 17683 565996 ~ 566341 (+)
G378300 NA non-coding upstream 91347 488802 ~ 492677 (+)
G378208 NA non-coding upstream 263902 318162 ~ 320122 (+)
G378213 NA non-coding upstream 266492 317330 ~ 317532 (+)
G378325 NA non-coding downstream 50960 637018 ~ 637549 (+)
G378327 NA non-coding downstream 63754 649812 ~ 650154 (+)
G378350 NA non-coding downstream 166071 752129 ~ 752425 (+)
G378351 NA non-coding downstream 167451 753509 ~ 753729 (+)
G378352 NA non-coding downstream 167934 753992 ~ 754221 (+)
CI01000186_00413028_00415878 SFRS3, SRSF3 other upstream 167701 412601 ~ 416323 (+)
G378108 NA other upstream 570529 11415 ~ 15229 (+)
G378343 NA other downstream 308450 881526 ~ 896717 (+)

Expression


Co-expression Network