CI01000186_00611336_00614260


Basic Information

Item Value
gene id CI01000186_00611336_00614260
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 611336 ~ 614580 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000186_00611336_00614260.mRNA
ATGAAAATCACAGCCAAAGGAACAGCAGCCTTCATTAAACTAGAGGACAAAAACACAGGTGAGCTGTTCGCTCAGGCTCCGGTGGATCAGTATCCGGGCAGTGCAGTGGAGGCCGTCACCGACTCCAGCCGATACTTCGTCATCAGGATCGAAGACGGAAACGGCCGTCACGCGTTCATCGGCATCGGTTTCGCTGACCGCGGCGATTCGTTCGATTTCAATGTGGCACTACAGGATCATTTCAAGTGGGTGAAACAGGAAAGTGAATTCGCCCGACAGGAAGCCACTCAGGATTCGGCGCCGAAGCTGGACTTGGGCTTCAAAGAGGGTCAGACCATCAAGATCAACATCGGGAACATCAAGAAGAAAGACCCCAGCGGGCCGGCGAAGTCTCGTGCAGCCGGCGGTTTGCTTCCTCCTCCTCCCGGTGTGAGAGCCGGTGGTCTCGTTCCTCCACCCGTAGTGCAGCAGATGACACCCGTCGCTCCGCCCAGCACAGGTCCACACAGGACACGCGCTCGGAGTGGGTGCAGTTCTAGCGTCCCGTGGTGCTTCTAGAAAGGGAACGTGAGAATGCGACGACACATGGACGCTGTTTTTCCACGGATGTTTTCTATGCAATCGGCCTGCGGTCGCTGATATTTGCTGCATTCCAGCTGCTGTCGAGTTTGAAACACGTTTCTCGTTAGTTACTCTCACACGGCTTCAGTTATGTGATGAATGTCGTCTCGTTTACCTGTTGATGTTAAAGCTGAAGTGTGCCATAATAACTGTTTTCGAACAGGTTTCCTGATTACTCGCCCCCATTGTTCGTCAAACAGGTAGCCCCGCCCAAAACTCACACCATTGGCTGAGCCAGAAGTTGACAGAACAAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000186_00611336_00614260.mRNA True 878 mRNA 0.53 6 611336 614580

Neighbor

gene id symbol gene type direction distance location
CI01000186_00606096_00608919 TMEM240B coding upstream 2138 606096 ~ 609198 (+)
CI01000186_00597558_00603062 SSU72L, SSU72 coding upstream 7949 597558 ~ 603387 (+)
CI01000186_00592130_00592897 FNDC10 coding upstream 18437 591854 ~ 592899 (+)
CI01000186_00584169_00586048 ORA3 coding upstream 25278 584024 ~ 586058 (+)
CI01000186_00578242_00581296 CCNL2 coding upstream 29963 578116 ~ 581373 (+)
CI01000186_00620849_00622738 CROCC coding downstream 6269 620849 ~ 622738 (+)
CI01000186_00627673_00630509 CROCC coding downstream 13093 627673 ~ 630509 (+)
CI01000186_00630683_00632213 CROCC coding downstream 16103 630683 ~ 632227 (+)
CI01000186_00652978_00654267 NA coding downstream 38311 652891 ~ 654900 (+)
CI01000186_00659009_00660385 MRPL20 coding downstream 44126 658706 ~ 660444 (+)
CI01000186_00567272_00571417 NA non-coding upstream 42509 566929 ~ 571768 (+)
G378322 NA non-coding upstream 44995 565996 ~ 566341 (+)
G378300 NA non-coding upstream 118659 488802 ~ 492677 (+)
G378208 NA non-coding upstream 291214 318162 ~ 320122 (+)
G378213 NA non-coding upstream 293804 317330 ~ 317532 (+)
G378325 NA non-coding downstream 22438 637018 ~ 637549 (+)
G378327 NA non-coding downstream 35232 649812 ~ 650154 (+)
G378350 NA non-coding downstream 137549 752129 ~ 752425 (+)
G378351 NA non-coding downstream 138929 753509 ~ 753729 (+)
G378352 NA non-coding downstream 139412 753992 ~ 754221 (+)
CI01000186_00413028_00415878 SFRS3, SRSF3 other upstream 195013 412601 ~ 416323 (+)
G378108 NA other upstream 597841 11415 ~ 15229 (+)
G378343 NA other downstream 279928 881526 ~ 896717 (+)

Expression


Co-expression Network