CI01000186_00796544_00798374


Basic Information

Item Value
gene id CI01000186_00796544_00798374
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 796544 ~ 798809 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000186_00796544_00798374.mRNA
GGACATTAAGGAAAACGGAGAGACCAAGACGGAAACGACGTACTCGTACAGTGAGTGTCGGCCGACTCCTGCCGTTTCTCGCAGTGTCTCAGGAACGTCTCACTGAGCTTGTGTTTCTTACAGACACAGAGTGGAAGTCGGAGGTCATCAGCAGCAGACACTTCGATCAGGAGGTCGGACACATGAACCCCAGTGCCATGGCGGTGGAGAGCGTGACGGTCGTGGCTCCGGACGTCTGGGTCGGGAGGCTCTTCCTGTCCAAAGGGCTGGTGGAGCAGATCAATGACTTCCAGACGCTGAGTCTCGCAGGACTTCCTGTTCCTGTGTCCAACACCTTCCTCACGGTGCAGGATGATTATTTTTACCACACGGCAAACCCTCGACGTCCAGAGGTCGGTGATGTTCGTGTTCGTTTCGCTTACGCTGGTCTCAGCGGTGATGGATTCTATCCTGGCTCCGCCCACAAGGTCAGTATTGTGGCCATGCAGCAGGCGGATCGGCTGACGGCCTTCAGGACACGGGCCGGAGGCGCGCTGGAGATCCTGTACATGGGCGATCTGTCAGCAGAGGAGGTGTTTGCTAAAGAACATCAGCTGAACGCCATGAAGACGTGGGCGCTGAGACTCGGAGGATGGGCGCTCATGTTTCTGTCCGTCAGTCTGAGCACACGCATCATCTACACACTGGTGGACAGTGTTCCTGTGCTGCGTGAGCTGGTGTCGGCGGGGCTGAAGATCTTCGCTCTCTGCGTCTCCTGTTCGCTGTCGTTGCTCACCATCGCCGCCGGCTGGATCTTCTATCGCCCTCTGCTGGGCGTGATGATAGCGCTGCTCGCACTCCTGCCGCTGCTCATCGCGCACGCTAGAGCGGCGTCCAAGAAAAACCAGTGACTAGTGTGACGTCCAGCAGTAATAATCGAACCATCAGCTTTGAGCTTCCTCAATGTTTTGAGCAGCTATAATGAACCTGTTTTTTTTTACACTGCAAATAATCATGTTCTTCCTCAGTGTTTCTGTCTTGTTTTCCAGCACAAATATCTAAACATTCTTAAATCAAGATACATTTACTGGAGAAGAGAAATGAAGGAAAAAATGTATCAAAATGTATCTGCCTTTGAATTGTTTATTTTTTTGACTCTATTAGCAGATAAGCAAAATCTCACTTCATTTCATTAAACAAGACTTTTTTGCTTCTCCAGTAAATGTTCTTGATTTAAGAATGTTTAGATGTTTGTGCTGGAAAACAAGACAGAAACACTGAGGAAGTGTTTTTTGCAGTGTGAGCTTCATGTACAGCGTCTGTTTCTTGTGTGTATGACTGCAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000186_00796544_00798374.mRNA True 1325 mRNA 0.50 7 796544 798809

Neighbor

gene id symbol gene type direction distance location
CI01000186_00773514_00774851 NA coding upstream 21582 773322 ~ 774962 (+)
CI01000186_00697638_00721963 SPEN coding upstream 74581 697583 ~ 721963 (+)
CI01000186_00692336_00696891 NA coding upstream 99258 692258 ~ 697286 (+)
CI01000186_00676085_00686938 FBXO42 coding upstream 108894 675557 ~ 687650 (+)
CI01000186_00661361_00666431 ATAD3A.S, ATAD3, ATAD3A.L, ATAD3B, ATAD3A coding upstream 130084 661032 ~ 666460 (+)
CI01000186_00941016_00950379 NA coding downstream 140730 939539 ~ 950529 (+)
G378352 NA non-coding upstream 42323 753992 ~ 754221 (+)
G378351 NA non-coding upstream 42815 753509 ~ 753729 (+)
G378350 NA non-coding upstream 44119 752129 ~ 752425 (+)
G378327 NA non-coding upstream 146390 649812 ~ 650154 (+)
G378325 NA non-coding upstream 158995 637018 ~ 637549 (+)
G378341 NA non-coding downstream 28697 827506 ~ 853304 (+)
G378340 NA non-coding downstream 36304 835113 ~ 916060 (+)
G378343 NA non-coding downstream 82717 881526 ~ 896717 (+)
CI01000186_00413028_00415878 SFRS3, SRSF3 other upstream 380221 412601 ~ 416323 (+)
G378108 NA other upstream 783049 11415 ~ 15229 (+)

Expression


Co-expression Network