CI01000186_00842940_00858572 (MYHZ1.1)


Basic Information

Item Value
gene id CI01000186_00842940_00858572
gene name MYHZ1.1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 842277 ~ 858696 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000186_00842940_00858572.mRNA
AATGGCCATCTGATATCAAACCTTTCAACTTGACACCACAATAACACTTGTGGCTTTTGCTGACAAATGGCAAAGCCCTGATGGCATAGCTGACCGACCAGCTATATTTGTGTAAAGTCCTAATATGACCACCCTTAGGGAAAGATGCCTTTTTTATGGAGCACATGTCCCCTTCTCATTAGGTGTCGACGCCTTAGAATTTATTCCACAGCCTCCTGCCATCTTTTCAAAGGAATTAGGAAAGCATGTTGGACACATTGCATTGTCCTTGCAAGGCAAAGCAAAAGAACATGAGCAGGATCCAAGATACAAAGTATTAAATGCTAGCGTCATCCCTGAGGGCCAGTTCATTGACAACAAAAAGGCTTCAGAGAAACTCTTGGGCTCTATTGATGTTGACCACACCCAATACAAGTTTGGGCACACCAAGGTGTTCTTCAAAGCTGGTCTGTTGGGTACTCTTGAGGAGATGAGAGATGAGAAACTAGCAACACTGGTTACCATGACTCAGGCTTTGTGCCGTGGATTTGTCATGAGGAAGGAGTTTGTCAAAATGATGGAAAGGAGAGGACAGGAGGACATGAAGGAGCAGGTGGCCATGGTGGAGCGCAGGAATAACCTGATGCAAGCAGAGATTGAGGAGCTGAGAGCTGCACTGGAGCAAACAGAGAGAGGCCGCAAAGTGGCGGAGCAGGAGCTGGTTGATGCCAGCGAGCGTGTGGGACTGCTGCACTCACAAAATACAAGTCTTATTAACACCAAGAAGAAGCTCGAGGCTGATCTGGTCCAGGTTCAAGGTGAGGTGGATGATTCAGTCCAGGAGGCCAGAAATGCAGAGGAGAAGGCCAAGAAGGCCATCACTGATGCTGCCATGATGGCTGAGGAGCTGAAGAAGGAGCAGGACACCAGTGCTCACCTGGAGAGGATGAAGAAGAACCTGGAGGTGACTGTCAAAGACCTGCAGCACCGTCTGGATGAGGCTGAAAGTCTGGCCATGAAGGGTGGAAAGAAACAGCTCCAGAAACTGGAGTCCAGGGTGCGTGAGTTAGAGTCTGAAGTTGAAGCTGAGCAGAGACGTGGTGCAGACGCTGTGAAAGGAGTGCGCAAATATGAGAGGAGGGTGAAGGAGCTCACCTACCAGACTGAGGAAGACAAGAAGAACGTGACCCGACTGCAGGATCTGGTAGACAAGCTGCAGCTGAAAGTGAAGGCCTACAAGCGCCAGGCTGAAGAAGCTGAGGAGCAGGCCAACACTCACCTGTCCAGGTACAGGAAGGTGCAGCATGAGCTGGAGGAGGCTCAGGAGCGCGCTGACATCGCCGAGTCCCAGGTCAACAAGCTGAGGGCCAAGAGCCGTGAAGCTGGAAAGACTGGTAGAGTATGGCACCAATGCCAAGATCACTGGTTTCCTAACTGACAACCAATGTTAAAATTAGAATGGATAAGTGTCTGTAACCCATTAAAAGTAACAAAATCTGTTTTCCAGGGGTTTAACTTTACATGCGCATATAGCAGCATAAACAACTGAACTTGTGGATTCACACATCATCACATCACACACCTGCAGTGCTTCTGTGAATGGAGAAAAACTGAATAAAAGTATATATATAAAAGGAATAAATATATTTCACTTAAATAATTAACAGATTAATGAAACGAAAGAAAAAACGGTTTCGACAAATAGTATATGCTGAGTTTCACTTTATTTTTGCGACGCACTCCACAAACAAGTTCACAGAAAAGAAACCAATACGGCAGAACGTGGCATCCTGTTTATTTTCTTTATTTTACAAAAACACGTTTATATTGTGAGTGTACACAAATAAAAGTAGACCCTTTACCCTCTCAAAAACTTAATTTTATATGTGTAGCATATTTTTGTTAACCATGTAGCAAACATTTTCAATATATCTTAAAATTAGCCTACTTTAAAAATTATTTAAATTAGTCTACTTTTTAAGCCATTGAGCCAATAGTATTAATCAGACAAAATTCTTACTGTCAGTTAATGGTTAACCAGTTATTATGAGCATCCCTAGTATTTAAAATAATTAATGCACATAACATTGTGTGAAATAAA

Function

symbol description
myhz1.1 Predicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Acts upstream of or within somite specification. Predicted to be part of myosin complex. Is expressed in several structures, including adaxial cell; brain; eye; musculature system; and somite. Human ortholog(s) of this gene implicated in arthrogryposis multiplex congenita; disease of cellular proliferation; and distal arthrogryposis (multiple). Orthologous to several human genes including MYH1 (myosin heavy chain 1) and MYH8 (myosin heavy chain 8).

NR:

description
fast skeletal muscle myosin heavy polypeptide 1, partial

GO:

id name namespace
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
K10352 MYH9s; myosin heavy chain 9/10/11/14

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000186_00842940_00858572.mRNA True 2080 mRNA 0.44 10 842277 858696

Neighbor

gene id symbol gene type direction distance location
CI01000186_00815815_00829935 MMYHEMB1, MMYHL2, MMYHL1 coding downstream 10975 815732 ~ 831302 (-)
CI01000186_00804745_00805695 ORA1 coding downstream 36524 804644 ~ 805753 (-)
CI01000186_00799178_00799351 RHOA coding downstream 42926 798930 ~ 800937 (-)
CI01000186_00777653_00779924 GDI1 coding downstream 60120 776720 ~ 782157 (-)
CI01000186_00768176_00773034 NA coding downstream 69175 767681 ~ 773102 (-)
CI01000186_00873286_00934953 MMYHEMB1, MYHB, MYHM86-1 coding upstream 14435 873131 ~ 934953 (-)
CI01000186_00956103_00957823 NA coding upstream 97407 956103 ~ 957823 (-)
G378634 NA non-coding downstream 33877 808171 ~ 808400 (-)
G378631 NA non-coding downstream 82063 759893 ~ 760214 (-)
CI01000186_00749734_00761177 PRKAR2A, SLC25A20, PRKAR2AB non-coding downstream 90864 749543 ~ 761177 (-)
G378623 NA non-coding downstream 100210 741788 ~ 742067 (-)
G378670 NA non-coding upstream 83593 942289 ~ 946294 (-)
CI01000186_00485805_00522951 CELSR2 other downstream 353794 485796 ~ 523767 (-)
G378509 NA other downstream 445522 396258 ~ 396755 (-)
CI01000186_00360860_00361637 NA other downstream 475286 360640 ~ 366991 (-)
CI01000186_00240507_00248051 DENND2DB other downstream 594193 240329 ~ 248084 (-)
CI01000186_00215443_00223579 STK38, STK38A, STK38B other downstream 618513 215399 ~ 223764 (-)

Expression


Co-expression Network