G378137


Basic Information

Item Value
gene id G378137
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 36442 ~ 36675 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU432190
CCACAAACAGATGTTTAATTAGCATTGTCAGCAAACTTCCATGGCCAACTAGCTTAATTTTAACTAATCTACTTCTGAATGTATGCACACATATTCCTCTTCTGGAAAAACTTACCACCAAGATGCTTAACTAGCAAAGCCAGCAAAACTTCTATGGTCAATCAGCATCGTCAGAAAAACCATGCTGGTAGACGAGGTGATCAACATGGTTGTTGTTGTTCCGAAATCTAGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU432190 True 234 lncRNA 0.39 1 36442 36675

Neighbor

gene id symbol gene type direction distance location
CI01000186_00016608_00025920 LMNB2 coding upstream 9688 16608 ~ 26754 (+)
CI01000186_00000433_00010367 LONP1 coding upstream 25749 433 ~ 10693 (+)
CI01000186_00091411_00095100 ING5, ING5A coding downstream 54304 90979 ~ 95538 (+)
CI01000186_00098106_00099994 NA coding downstream 60501 97176 ~ 100163 (+)
CI01000186_00102313_00108968 PAK2 coding downstream 65437 102112 ~ 109867 (+)
CI01000186_00111894_00116331 NA coding downstream 75219 111894 ~ 116838 (+)
CI01000186_00120791_00130397 NA coding downstream 84116 120791 ~ 130397 (+)
G378136 NA non-coding upstream 737 35441 ~ 35705 (+)
G378134 NA non-coding upstream 2216 33958 ~ 34226 (+)
G378131 NA non-coding upstream 5418 30476 ~ 31024 (+)
G378130 NA non-coding upstream 6721 29496 ~ 29721 (+)
G378128 NA non-coding upstream 20474 15491 ~ 15968 (+)
G378145 NA non-coding downstream 15505 52180 ~ 52481 (+)
G378146 NA non-coding downstream 15948 52623 ~ 52847 (+)
G378147 NA non-coding downstream 16199 52874 ~ 53098 (+)
G378148 NA non-coding downstream 16675 53350 ~ 53763 (+)
G378184 NA non-coding downstream 116390 153065 ~ 153273 (+)
G378108 NA other upstream 22947 11415 ~ 15229 (+)
CI01000186_00413028_00415878 SFRS3, SRSF3 other downstream 375145 412601 ~ 416323 (+)
G378343 NA other downstream 857833 881526 ~ 896717 (+)

Expression


Co-expression Network