Gene
RNA
| Item | Value |
|---|---|
| gene id | G378187 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000186 |
| NCBI id | null |
| chromosome length | 966831 |
| location | 158339 ~ 158576 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU432255 | True | 238 | lncRNA | 0.45 | 1 | 158339 | 158576 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000186_00133147_00140951 | LAMB3 | coding | upstream | 17388 | 133147 ~ 140951 (+) |
| CI01000186_00120791_00130397 | NA | coding | upstream | 27942 | 120791 ~ 130397 (+) |
| CI01000186_00111894_00116331 | NA | coding | upstream | 41501 | 111894 ~ 116838 (+) |
| CI01000186_00102313_00108968 | PAK2 | coding | upstream | 48472 | 102112 ~ 109867 (+) |
| CI01000186_00098106_00099994 | NA | coding | upstream | 58176 | 97176 ~ 100163 (+) |
| CI01000186_00190672_00191178 | NA | coding | downstream | 31578 | 190154 ~ 191358 (+) |
| CI01000186_00192359_00208026 | CACNA1S, CACNA1SA, CACNA1SB | coding | downstream | 33783 | 192359 ~ 208311 (+) |
| CI01000186_00209162_00212762 | KCTD20 | coding | downstream | 50586 | 209162 ~ 213137 (+) |
| CI01000186_00225560_00231307 | CEPT1, CEPT1B | coding | downstream | 66984 | 225560 ~ 231570 (+) |
| CI01000186_00235234_00237816 | DRAM2, DRAM2B | coding | downstream | 76321 | 234897 ~ 238121 (+) |
| G378184 | NA | non-coding | upstream | 5066 | 153065 ~ 153273 (+) |
| G378148 | NA | non-coding | upstream | 104576 | 53350 ~ 53763 (+) |
| G378147 | NA | non-coding | upstream | 105241 | 52874 ~ 53098 (+) |
| G378146 | NA | non-coding | upstream | 105492 | 52623 ~ 52847 (+) |
| G378145 | NA | non-coding | upstream | 105858 | 52180 ~ 52481 (+) |
| G378117 | NA | non-coding | downstream | 4398 | 162974 ~ 165447 (+) |
| G378204 | NA | non-coding | downstream | 86854 | 245430 ~ 248174 (+) |
| G378213 | NA | non-coding | downstream | 158754 | 317330 ~ 317532 (+) |
| G378208 | NA | non-coding | downstream | 159586 | 318162 ~ 320122 (+) |
| G378300 | NA | non-coding | downstream | 330226 | 488802 ~ 492677 (+) |
| G378108 | NA | other | upstream | 144844 | 11415 ~ 15229 (+) |
| CI01000186_00413028_00415878 | SFRS3, SRSF3 | other | downstream | 253244 | 412601 ~ 416323 (+) |
| G378343 | NA | other | downstream | 735932 | 881526 ~ 896717 (+) |
