Gene
RNA
| Item | Value |
|---|---|
| gene id | G378517 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000186 |
| NCBI id | null |
| chromosome length | 966831 |
| location | 444388 ~ 444877 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU432695 | True | 490 | lncRNA | 0.26 | 1 | 444388 | 444877 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000186_00433415_00435816 | USP49 | coding | downstream | 8394 | 432833 ~ 435994 (-) |
| CI01000186_00408656_00408943 | NA | coding | downstream | 35445 | 408135 ~ 408943 (-) |
| CI01000186_00360860_00361637 | NA | coding | downstream | 81688 | 360640 ~ 366991 (-) |
| CI01000186_00340443_00342720 | ELF3 | coding | downstream | 101422 | 340271 ~ 342966 (-) |
| CI01000186_00318098_00318475 | NA | coding | downstream | 125913 | 317728 ~ 318475 (-) |
| CI01000186_00453106_00464818 | NUAK2 | coding | upstream | 7215 | 452092 ~ 464818 (-) |
| CI01000186_00485805_00522951 | CELSR2 | coding | upstream | 40928 | 485796 ~ 523767 (-) |
| CI01000186_00525649_00532282 | CAPZB, CAPZB.L | coding | upstream | 80679 | 525556 ~ 532353 (-) |
| CI01000186_00588218_00590230 | ORA4 | coding | upstream | 143341 | 588218 ~ 590804 (-) |
| CI01000186_00640328_00644798 | MFAP2 | coding | upstream | 194295 | 639172 ~ 648186 (-) |
| G378482 | NA | non-coding | downstream | 121607 | 322529 ~ 322781 (-) |
| G378481 | NA | non-coding | downstream | 141899 | 302211 ~ 302489 (-) |
| G378480 | NA | non-coding | downstream | 143154 | 300886 ~ 301234 (-) |
| G378399 | NA | non-coding | downstream | 203317 | 240855 ~ 241071 (-) |
| G378476 | NA | non-coding | downstream | 228345 | 215782 ~ 216043 (-) |
| G378520 | NA | non-coding | upstream | 3232 | 448109 ~ 448422 (-) |
| G378522 | NA | non-coding | upstream | 6159 | 451036 ~ 451418 (-) |
| G378539 | NA | non-coding | upstream | 90829 | 535706 ~ 535908 (-) |
| G378540 | NA | non-coding | upstream | 91316 | 536193 ~ 536507 (-) |
| G378541 | NA | non-coding | upstream | 91752 | 536629 ~ 536950 (-) |
| G378509 | NA | other | downstream | 47633 | 396258 ~ 396755 (-) |
| CI01000186_00240507_00248051 | DENND2DB | other | downstream | 196304 | 240329 ~ 248084 (-) |
| CI01000186_00215443_00223579 | STK38, STK38A, STK38B | other | downstream | 220624 | 215399 ~ 223764 (-) |
| G378466 | NA | other | downstream | 250628 | 192170 ~ 193760 (-) |
