Gene
RNA
| Item | Value |
|---|---|
| gene id | G378540 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000186 |
| NCBI id | null |
| chromosome length | 966831 |
| location | 536193 ~ 536507 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU432718 | True | 315 | lncRNA | 0.44 | 1 | 536193 | 536507 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000186_00525649_00532282 | CAPZB, CAPZB.L | coding | downstream | 3840 | 525556 ~ 532353 (-) |
| CI01000186_00485805_00522951 | CELSR2 | coding | downstream | 12426 | 485796 ~ 523767 (-) |
| CI01000186_00453106_00464818 | NUAK2 | coding | downstream | 71375 | 452092 ~ 464818 (-) |
| CI01000186_00433415_00435816 | USP49 | coding | downstream | 100199 | 432833 ~ 435994 (-) |
| CI01000186_00408656_00408943 | NA | coding | downstream | 127250 | 408135 ~ 408943 (-) |
| CI01000186_00588218_00590230 | ORA4 | coding | upstream | 51711 | 588218 ~ 590804 (-) |
| CI01000186_00640328_00644798 | MFAP2 | coding | upstream | 102665 | 639172 ~ 648186 (-) |
| CI01000186_00656484_00658437 | SDHB | coding | upstream | 119786 | 656293 ~ 658614 (-) |
| CI01000186_00723511_00725818 | NA | coding | upstream | 186819 | 723145 ~ 725921 (-) |
| CI01000186_00749734_00761177 | PRKAR2A, SLC25A20, PRKAR2AB | coding | upstream | 213036 | 749543 ~ 761177 (-) |
| G378539 | NA | non-coding | downstream | 285 | 535706 ~ 535908 (-) |
| G378522 | NA | non-coding | downstream | 84775 | 451036 ~ 451418 (-) |
| G378520 | NA | non-coding | downstream | 87771 | 448109 ~ 448422 (-) |
| G378517 | NA | non-coding | downstream | 91316 | 444388 ~ 444877 (-) |
| G378482 | NA | non-coding | downstream | 213412 | 322529 ~ 322781 (-) |
| G378541 | NA | non-coding | upstream | 122 | 536629 ~ 536950 (-) |
| G378591 | NA | non-coding | upstream | 46646 | 583153 ~ 583369 (-) |
| G378590 | NA | non-coding | upstream | 48344 | 584851 ~ 585279 (-) |
| G378592 | NA | non-coding | upstream | 49338 | 585845 ~ 586096 (-) |
| G378564 | NA | non-coding | upstream | 101142 | 637649 ~ 639093 (-) |
| G378509 | NA | other | downstream | 139438 | 396258 ~ 396755 (-) |
| CI01000186_00360860_00361637 | NA | other | downstream | 169202 | 360640 ~ 366991 (-) |
| CI01000186_00240507_00248051 | DENND2DB | other | downstream | 288109 | 240329 ~ 248084 (-) |
| CI01000186_00215443_00223579 | STK38, STK38A, STK38B | other | downstream | 312429 | 215399 ~ 223764 (-) |
