Gene
RNA
| Item | Value |
|---|---|
| gene id | G378592 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000186 |
| NCBI id | null |
| chromosome length | 966831 |
| location | 585845 ~ 586096 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU432775 | True | 252 | lncRNA | 0.48 | 1 | 585845 | 586096 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000186_00525649_00532282 | CAPZB, CAPZB.L | coding | downstream | 53492 | 525556 ~ 532353 (-) |
| CI01000186_00485805_00522951 | CELSR2 | coding | downstream | 62078 | 485796 ~ 523767 (-) |
| CI01000186_00453106_00464818 | NUAK2 | coding | downstream | 121027 | 452092 ~ 464818 (-) |
| CI01000186_00433415_00435816 | USP49 | coding | downstream | 149851 | 432833 ~ 435994 (-) |
| CI01000186_00408656_00408943 | NA | coding | downstream | 176902 | 408135 ~ 408943 (-) |
| CI01000186_00588218_00590230 | ORA4 | coding | upstream | 2122 | 588218 ~ 590804 (-) |
| CI01000186_00640328_00644798 | MFAP2 | coding | upstream | 53076 | 639172 ~ 648186 (-) |
| CI01000186_00656484_00658437 | SDHB | coding | upstream | 70197 | 656293 ~ 658614 (-) |
| CI01000186_00723511_00725818 | NA | coding | upstream | 137230 | 723145 ~ 725921 (-) |
| CI01000186_00749734_00761177 | PRKAR2A, SLC25A20, PRKAR2AB | coding | upstream | 163447 | 749543 ~ 761177 (-) |
| G378590 | NA | non-coding | downstream | 566 | 584851 ~ 585279 (-) |
| G378591 | NA | non-coding | downstream | 2476 | 583153 ~ 583369 (-) |
| G378541 | NA | non-coding | downstream | 48895 | 536629 ~ 536950 (-) |
| G378540 | NA | non-coding | downstream | 49338 | 536193 ~ 536507 (-) |
| G378539 | NA | non-coding | downstream | 49937 | 535706 ~ 535908 (-) |
| G378564 | NA | non-coding | upstream | 51553 | 637649 ~ 639093 (-) |
| G378560 | NA | non-coding | upstream | 67707 | 653803 ~ 654892 (-) |
| G378552 | NA | non-coding | upstream | 80950 | 667046 ~ 671996 (-) |
| G378600 | NA | non-coding | upstream | 86313 | 672409 ~ 672749 (-) |
| G378604 | NA | non-coding | upstream | 116192 | 702288 ~ 703665 (-) |
| G378509 | NA | other | downstream | 189090 | 396258 ~ 396755 (-) |
| CI01000186_00360860_00361637 | NA | other | downstream | 218854 | 360640 ~ 366991 (-) |
| CI01000186_00240507_00248051 | DENND2DB | other | downstream | 337761 | 240329 ~ 248084 (-) |
| CI01000186_00215443_00223579 | STK38, STK38A, STK38B | other | downstream | 362081 | 215399 ~ 223764 (-) |
