G378352


Basic Information

Item Value
gene id G378352
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000186
NCBI id null
chromosome length 966831
location 753992 ~ 754221 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU432501
ACTGTCTCTGAAAAGCTATGAATGACCTGGATGAGTTGGCTATTAATATCCGCTGATCCATGACTAGGAGGAGATGATGATATAGGTATAGTCGTTTGGCTGCTCTGGGAAAAGACGACTTGGCTGTACGTTTTCCTACCGGCTAGCTTGGGCTGAGCTGACGGTGTTGGAGATGTTGGAAGGGGATTCGCAGGTGTAACTAAGGAGCCGTCCAGGGTATTAGAAGCCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU432501 True 230 lncRNA 0.48 1 753992 754221

Neighbor

gene id symbol gene type direction distance location
CI01000186_00697638_00721963 SPEN coding upstream 32029 697583 ~ 721963 (+)
CI01000186_00692336_00696891 NA coding upstream 56706 692258 ~ 697286 (+)
CI01000186_00676085_00686938 FBXO42 coding upstream 66342 675557 ~ 687650 (+)
CI01000186_00661361_00666431 ATAD3A.S, ATAD3, ATAD3A.L, ATAD3B, ATAD3A coding upstream 87532 661032 ~ 666460 (+)
CI01000186_00659009_00660385 MRPL20 coding upstream 93548 658706 ~ 660444 (+)
CI01000186_00773514_00774851 NA coding downstream 19101 773322 ~ 774962 (+)
CI01000186_00796544_00798374 NA coding downstream 42323 796544 ~ 798809 (+)
CI01000186_00941016_00950379 NA coding downstream 185318 939539 ~ 950529 (+)
G378351 NA non-coding upstream 263 753509 ~ 753729 (+)
G378350 NA non-coding upstream 1567 752129 ~ 752425 (+)
G378327 NA non-coding upstream 103838 649812 ~ 650154 (+)
G378325 NA non-coding upstream 116443 637018 ~ 637549 (+)
CI01000186_00567272_00571417 NA non-coding upstream 185165 566929 ~ 571768 (+)
G378290 NA non-coding downstream 1139 755360 ~ 799355 (+)
G378341 NA non-coding downstream 73285 827506 ~ 853304 (+)
G378340 NA non-coding downstream 80892 835113 ~ 916060 (+)
G378343 NA non-coding downstream 127305 881526 ~ 896717 (+)
CI01000186_00413028_00415878 SFRS3, SRSF3 other upstream 337669 412601 ~ 416323 (+)
G378108 NA other upstream 740497 11415 ~ 15229 (+)

Expression


Co-expression Network