CI01000195_00132902_00133243


Basic Information

Item Value
gene id CI01000195_00132902_00133243
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000195
NCBI id null
chromosome length 1404554
location 130473 ~ 133243 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000195_00132902_00133243.mRNA
ATCCAAAATGAATTCATCCTGCAGAGATGTCTGAACTTCAGATTGGTACCAGTGCTGTTTCCCAATGCCAACCAAAGTCATGTTCCACTGTGGCTGCAGAGCACTCGTCTGTACCGGTGGCCTGAGGATGCTAAGGACCTCTTACTGCGTTTACTCAGAGAAGAGAAATACATTGTCCCTCCGCTGGGCAAAGAGCTGACACTCACTATCAAACCCCTATAAGCATTGACTAAATGTGATTATGCATTTAGGCATCTCACTTGCATGAAAACATTCATTATTCCTCAAAATAAGTAAAAACAGTGAAATACAATCTCAGAATTTTATGCAAATTTGTAATAATTAAATATATTAAATTACACAAATATACTGTAAGTATTTAATCTCACTTTATTAACCAATGGCTTTGCTGCTGACCTTCAATGATCTAATTCAACCATACTAATAAGCAAACATTGCTTTAGATTAGATTTAGAAATAAGAGTGTTGATCTTCCTTCTCCTTTATCCTATTGTTCTTTAATCCAGAATGGCAGCACAGCTGAAAGGTTTGATTGAGCTTTGCCCTCTACTGTACAGCCCCTGCTCCTGCCCCTGCCCCTGCCCCTGCCCCTGCTCCTGCCCGTGCTCCTGCCCCTGCCCCTGCCCCTTTGATTGCAAAAATGAAAGTGCCCATTTCTCCTCCCCCAGAACGCGATTTCTACCGATGGATTTCTACCGACGGAGACCCACAACCACATGCCCCATCCCCCACCCCTGCTTTCGCCCCCTGCCCTCCTGGAGGTCTGTGCATGCCACTGCTTTTGAGTGTACTGTAACATGGTTTTCATTTAGAGTTTACCTTTTGGGCTTTTGCATTTGGACTACTGTATTTTTACAGTATGCAAGTGCTGAATATACAAACATTCAATACTATACAATATTCAGTACAATACTATACTTTCAATGCATACAGTATCAATTTATTCACCTTACTACTGTAAGATTACAATACTTTTTTTACATAATTGCAAAATTAATTTACTGTGTTACAATATACTTTTTTCTATAACTACATGCTTTGGATGCTGTGATCTCCGTTTTTTGATGTAGTTTCTAATGAATGATCTGTAGTGTTTATATTTTGACTGGCTGTGTGTGTGATTTGAAAGCATTATTTGATTTTGAGCACATTTAAAATTTTAGTGTGAAATTACAGTATATTCCAGGTTAATAATTACATGACTTTCACAGTAATTCCACAGTAGGACTTCTCTTGTATCTAACTGCATTCTTGGAATATCATACTGTATTGCAGCATGAATAGATTATGCTGTGGAGTTTCTTGATTTTTGTTGGTTTTATCTGTGCTGCTAAACTTACTTTTGGTTCACTTATAGCAGTTTGTGTTTGTTTATTTTGTAATGTTCAGAATTTATATTTTTTATTTTTTACAGTTTTTGTTGATTACTAACACACTATAACTGGTTCAGTTGGCCCAATTTCCCAAACCATTCGTTCAGTTCTAGAAACAAAGTTGCGTTTAACACATTTCACTTGTTTTTACACACACTTCAGTTTTCTTAATGTCTCAATTAAGTGGACAATGATTTTTTATTTACTGCATTATTGTTTGTTATTGCAATGCTGTGGTTGTCTCTGTGAGTTATAGTATGTAAATTTAGAGAGCGTTTGTAACTGTGAAAACTAACTTTGTAGCAGACTTAACTGCACTTCAAACCACAGTGACATGACAGTCATTCACAAAGTCCACACTAACTAGATTTTCGTTTGAAAAGGCATCTTTTTCTCTACGTTTTGGCCTTCCACACTGAGACGGCATTTTTATTAACAAAAAAGCTTTTTTGAAAACGCCATTTTCACTTTGTAGTGTGGACTGTGAAAACAGGTATAGGTATTTGAAAACGATGATGCATGTTTAATCATGTAACGCCAGATATTCATGTTTATACCGGTATTGTGCCTGTTATGTGCCATTCACTTTCACACAGTTGCTAAAATATGTTAATTTGCACACTCTTCATAGCGTGAGAACTTTATTATTGTTCTGTCTGTATCTCAGTGAGCTTTTATGAAGGTTTATGCATGTGCAGTAAGGTGAATTTTAGCGTTTTCCAACGTTTGTTTTGGAAAATGCTTGAAAACCCTAGTGTGGACGGAGACAGTTTTAAAAAAAGAAAGTCATTTTCAAATCTATCCGGATTAATGTAGACGTAGCCTCAGCCAGTGAACAAGCAATAAA
>TU441017
AGTGACATGACAGTCATTCACAAAGTCCACACTAACTAGATTTTCGTTTGAAAAGGCATCTTTTTCTCTACGTTTTGGCCTTCCACACTGAGACGGCATTTTTATTAACAAAAAAGCTTTTTTGAAAACGCCATTTTCACTTTGTAGTGTGGACTGTGAAAACAGGTATAGGTATTTGAAAACGATGATGCATGTTTAATCATGTAACGCCAGATATTCATGTTTATACCGGTATTGTGCCTGTTATGTGCCATTCACTTTCACACAGTTGCTAAAATATGTTAATTTGCACACTCTTCATAGCGTGAGAACTTTATTATTGTTCTGTCTGTATCTCAGTGAGCTTTTATGAAGGTTTATGCATGTGCAGTAAGGTGAATTTTAGCGTTTTCCAACGTTTGTTTTGGAAAATGCTTGAAAACCCTAGTGTGGACGGAGACAGTTTTAAAAAAAGAAAGTCATTTTCAAATCTATCCGGATTAATGTAGACGTAGCCTCAGCCAGTGAACAAGCAATAAACTGTTCTGATCTTGAATGAATGTATTCTGCGCTAATGTAAAATGCCTCCAATTGACAATTGCATTCATGCTCCAAACAGCCATGTCCGCAATCGGCTATGCTCGTCACTGCAAAAAGCATTTTAAATACAAACCTTCAACTCTCTTCAATCTCTTTTTTTATTGACTACATGACCCACAGTCCATTACCGTCACTATGATTCACGTTCGTAACAGCGCACTTCACATTGAACATCAGCATTACTCTGCATTTCAATTTGCATTATTGTGCCCCCTTCCCTATTTACAGGGCTCTCTCAAAGTAAGCTTTTTTTTTTATTATTAAGTTTTTACATTGGCACAAAGAAAAATTCCAACAAAGTTATGGTTCAATTATTGCTTTCCTATTAAAATAATTAATAAAAGGTTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000195_00132902_00133243.mRNA False 2241 mRNA 0.37 2 130883 133243
TU441017 True 929 lncRNA 0.36 1 130473 131401

Neighbor

gene id symbol gene type direction distance location
CI01000195_00109629_00111249 NA coding downstream 17619 108141 ~ 113264 (-)
CI01000195_00170752_00172146 NA coding upstream 36486 169729 ~ 172378 (-)
CI01000195_00230161_00241109 NA coding upstream 95860 229103 ~ 242123 (-)
CI01000195_00267729_00269461 NA coding upstream 134104 267347 ~ 269653 (-)
CI01000195_00277321_00278413 NA coding upstream 143631 276874 ~ 278738 (-)
CI01000195_00286609_00287289 NA coding upstream 153124 286367 ~ 287315 (-)
G385534 NA non-coding downstream 7037 123363 ~ 123846 (-)
G385526 NA non-coding downstream 8891 121186 ~ 121992 (-)
G385076 NA non-coding downstream 27520 103160 ~ 103363 (-)
G385056 NA non-coding downstream 83665 46858 ~ 47218 (-)
G385529 NA non-coding upstream 55379 188622 ~ 194606 (-)
G385523 NA non-coding upstream 94225 227468 ~ 274671 (-)
G385531 NA non-coding upstream 143041 276284 ~ 281648 (-)
G385599 NA non-coding upstream 214979 348222 ~ 353014 (-)
G385632 NA non-coding upstream 252749 385992 ~ 388235 (-)
G385070 NA other downstream 33364 97058 ~ 97519 (-)
G385869 NA other upstream 1067113 1200356 ~ 1209651 (-)

Expression


Co-expression Network