CI01000195_00375179_00378443


Basic Information

Item Value
gene id CI01000195_00375179_00378443
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000195
NCBI id null
chromosome length 1404554
location 374199 ~ 378443 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000195_00375179_00378443.mRNA
ATGACACCTGCTGAAGCAGCGCCGAAGAAAAAACACGTTCGGTTTGCCAGGATGGAAGAGGACATTGACCGCGACGAACAGGAAGAGGATACCCTTTTCGACAAGCGTAAAGACATTAAGGAGGGGCTGAAAAGTGCTCTAAAGGGGGGTAAAGGGGTACTGAACCCGCGGTCCGATCAGGTTGATGTAGTTCGACCAGGACGGAGCCAGAGCAATACTGGGACATGCTGGCGATGGCTGGTCAGCCTTGCGCTTTGCGCATCGTTTCTCGGACTGGGAATGGCCATTTCTGTATTGGGCCCTACCTTTGAAGACCTGGCTATCAATGTCAACCAGAACATCAGTAATTTATCCTATATATTTGTGGGTCGTTCATCAGGATACATTGGAGGCTCCCTGTTAGGAGGGATCCTTTTTGACTGTGTGAATCCCCATCTGCTTTTGGGCTTCTCGTTGTTAATCACAGCGTTTGGGATGTCTAGCACTCCCTTCTGTAAAAAGGCTTGGCTGCTCACTGTTTTGATGTCCAGTGTGGGGGTTTCAATGGGAATTTTAGATACAGGTGGTAATGTTCTCATCCTGAACACATGGGGAGAGCAGGCTGGGCCTCATCTGCAGGCTCTGCACTTTAGCTTTGCTGCTGGAGCCTTTGCCTCCCCAATCATAGCCAAGCTGCTGTTCGGCCACCGTTCCGACAATGACTCCATTAACACTCCTTCAGTGTCTGGCCACGCCTCTAAGACCCTCTTGCCATTCTCCCATCCAAAGAGCACTCCTTTAACATCCATGTGGGCCTACATTGTGATTGGTGCTTTTGTTTTACTTGTGTCGCTCTTCTTTTTTATCCTGTACTCCTGCAGTTCCCCCAACTCAAATAGGGCAAAGACACCATCAGGGAAGCAGCTGTTCTCCAAACATCACAACACACTTATATTCCTGCTGTCCGTGTTCTTCTTCTTCTATGTTGGAAGCGAGGTGGCGTACGGTTCCTTTATATTTACCTATAGCAAGGACTATGCTGGTATGAAAGAGGCTCATGCAGCAGGACTGAATTCGCTGTTCTGGGGAACGTTTGCAGCTGGTCGTGGTCTGGCCATATTCTTTGCGGCTTGCCTGCGCCCAGGCTCCCTGATCCTGCTGAGTCTAGTGGGCACCACAGTTTCCTCACTCTTGCTGTGTCTTTTTAGCCAAAATTCCACTATGCTCTGGACCTGCACTGCCCTGTATGGTGTCTCTATGTCTACCACCTTTCCCAGTGGGATTTCATGGGTTGAGCAGTACACAACTGTGACAGGGCGCTCAGCTGCAGTGTTTGTGGTGGGTGCAGCTCTTGGAGAAATGGTTCTGCCAGCTCTGTTGGGCTTCTTACTGGGGCAGGTGCAGAATCAGCCATTGCTGATGTACCTGGCGCTTTGCACATCCACCTTCACTTCTATCCTGTTCCCTGTCTTGTACAAACTAGCATCACCAGGAGGGGACGCCACCTTACGGAAAACATCAGGGAGACGCACCAAGGATGCAGATGACAGCGAGTACCGCCAAGCACTGCTAGACAATGTGGAGGAAGAGGAACAGGAAAATGAAAGTGAAGCTGACCAGTGGAATGATGCAGACTTTGAGGTGATAGAGATGGATGATGCCAGCCTGTTGAGCTCTCCTTCTAAAGCCTCAGTGCCACCTGATATTGCAGCTAGTGAGCTTGCTGCTCACTCAATGGCCGCCCCATTGTCAGCACCCTCAAGAGACACCACAGCCCTGACCTCTCTGTCTAACACTCCGTCTTTTCTCACAGACTCTCCCAGACACAAACTCTTAATGTCCCTCAACAGGGAGAAGAAAGACTAATTTATTGCACTACGTCAAAGATGTCTCAGACTTTAGCCCGGAACTGAGAAGTGGCTGCTAAATCCTGCACACCACATCAACCTGAAGCATTTTTTCCCCTTTGGTGAAAAGATCACACTAGCCAGTTGATTTGCACTTTCCAAATGCCAGTTGCATGTTTCATGGTCCTTATGGCAACACACCACTGTACAGGATTATCTGAAAGAAGTTTAATTAGCATATTGGACATTAACTGAGAATTGACCTGTCTTTGAAGGTCAGCCTTATTATTGGACACCAATGTATATTAGGATTATATTAAGATATTGGACTTATGCATCTCTCCTCTTATTTGTTATTGATTGATTTACCTTAGATCAAAGGTTTTGTACAATTGTAACCAGCACAATACACTAGTCTTAAGAACTGTGAACTAAGGCAACATTTTTTTGTATTGTATGGTTAGATTGAATGTATAAAAAGTTTCATTAATAATATTTTGATGTTTAAGTCTTTCTTGAAAATCCTCACATTTTACGTTCACAAAATATTTTTTATTCATTTTTCAATCATACTGAATGCTTGGTAATTACTAAATCATTAGCACATTATGGTTTAAGTGAACATTATGTTTTCAGTGTAGACAGACCAGTTGCTTCTGGTTTGGACACAGCGTGTGTTTAGAGAACACAACTGCCAGTTTCCTTGATACTTTTGCAGGGTTTTTTTGTCCCCCAAAAGTTCTGATACTGCATTTAACAATATTGACAATTTTGTATTAACTTAAATCAAATCTTACATTATTTTCTAGAAATGTTTCAATCCGTTTTACAATTTTATTGCTCTGTTAATAACCAATATGTGGAAAAAATTCTGCACTGCATAAATATTTGACTGATTTGTGAATTACAATAGTGTATACCCCAAGATGATGTAAGGACCCATTTTAATAGAAACAAGCATTTTTTAAATACATCGACTTTTATTATATCAATATTAAA

Function

GO:

id name namespace
GO:0005355 glucose transmembrane transporter activity molecular_function

KEGG:

id description
K08175 NAGLT1; MFS transporter, FHS family, Na+ dependent glucose transporter 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000195_00375179_00378443.mRNA True 2825 mRNA 0.44 4 374199 378443

Neighbor

gene id symbol gene type direction distance location
CI01000195_00286609_00287289 NA coding downstream 86884 286367 ~ 287315 (-)
CI01000195_00277321_00278413 NA coding downstream 95461 276874 ~ 278738 (-)
CI01000195_00267729_00269461 NA coding downstream 104546 267347 ~ 269653 (-)
CI01000195_00230161_00241109 NA coding downstream 132076 229103 ~ 242123 (-)
CI01000195_00170752_00172146 NA coding downstream 201821 169729 ~ 172378 (-)
CI01000195_00473436_00498770 PLEKHG3 coding upstream 94939 473382 ~ 498770 (-)
CI01000195_00540011_00558639 NA coding upstream 160969 539412 ~ 558639 (-)
CI01000195_00781053_00802555 CEBPZ coding upstream 402415 780858 ~ 802555 (-)
CI01000195_00823303_00824935 MARCKS coding upstream 444486 822929 ~ 825488 (-)
CI01000195_00947211_00947449 NA coding upstream 568560 947003 ~ 947449 (-)
G385599 NA non-coding downstream 21185 348222 ~ 353014 (-)
G385531 NA non-coding downstream 92551 276284 ~ 281648 (-)
G385523 NA non-coding downstream 99528 227468 ~ 274671 (-)
G385529 NA non-coding downstream 179593 188622 ~ 194606 (-)
CI01000195_00132902_00133243 NA non-coding downstream 242798 130473 ~ 133243 (-)
G385632 NA non-coding upstream 7549 385992 ~ 388235 (-)
G385656 NA non-coding upstream 40642 419085 ~ 419843 (-)
G385617 NA non-coding upstream 77590 456033 ~ 467356 (-)
G385672 NA non-coding upstream 241785 620228 ~ 621382 (-)
G385709 NA non-coding upstream 266794 645237 ~ 645763 (-)
G385070 NA other downstream 276680 97058 ~ 97519 (-)
G385869 NA other upstream 821913 1200356 ~ 1209651 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_017098 mfsd4b coding NC_007131.7 CM002904.2 3339248 ~ 3345526 (+)
bowfin (Amia calva) AMCG00003806 NA coding CM030121.1 CM030121.1 18879535 ~ 18889212 (-)