Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000195_00972854_00976498 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000195 |
| NCBI id | null |
| chromosome length | 1404554 |
| location | 972348 ~ 976713 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| Apolipoprotein A-IV, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000195_00972854_00976498.mRNA | False | 1350 | mRNA | 0.40 | 5 | 972348 | 976661 |
| TU441166 | False | 307 | lncRNA | 0.48 | 3 | 976227 | 976713 |
| TU441167 | True | 266 | lncRNA | 0.49 | 3 | 976227 | 976672 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000195_00959548_00967537 | NA | coding | downstream | 4648 | 958437 ~ 967751 (-) |
| CI01000195_00947211_00947449 | NA | coding | downstream | 24899 | 947003 ~ 947449 (-) |
| CI01000195_00823303_00824935 | MARCKS | coding | downstream | 146860 | 822929 ~ 825488 (-) |
| CI01000195_00781053_00802555 | CEBPZ | coding | downstream | 169793 | 780858 ~ 802555 (-) |
| CI01000195_00540011_00558639 | NA | coding | downstream | 413709 | 539412 ~ 558639 (-) |
| CI01000195_00977328_00985633 | NA | coding | upstream | 619 | 977280 ~ 985652 (-) |
| CI01000195_00989184_00990148 | APOA4B.3, APOA4B.2, APOA4B.1 | coding | upstream | 12180 | 988841 ~ 990313 (-) |
| CI01000195_00991613_00991972 | NA | coding | upstream | 14890 | 991551 ~ 992010 (-) |
| CI01000195_00993847_00994487 | APOA4B.3, APOA4B.2, APOA4B.1 | coding | upstream | 17078 | 993739 ~ 994653 (-) |
| CI01000195_00996731_00996946 | NA | coding | upstream | 19985 | 996646 ~ 998493 (-) |
| G385609 | NA | non-coding | downstream | 56524 | 913541 ~ 915824 (-) |
| G385730 | NA | non-coding | downstream | 268148 | 702339 ~ 704200 (-) |
| G385722 | NA | non-coding | downstream | 289069 | 680705 ~ 683279 (-) |
| G385709 | NA | non-coding | downstream | 326585 | 645237 ~ 645763 (-) |
| G385854 | NA | non-coding | upstream | 83900 | 1060561 ~ 1061208 (-) |
| G385881 | NA | non-coding | upstream | 113647 | 1090308 ~ 1091004 (-) |
| G385887 | NA | non-coding | upstream | 124822 | 1101483 ~ 1101764 (-) |
| G385888 | NA | non-coding | upstream | 127345 | 1104006 ~ 1104291 (-) |
| G385896 | NA | non-coding | upstream | 156393 | 1133054 ~ 1133349 (-) |
| G385070 | NA | other | downstream | 874829 | 97058 ~ 97519 (-) |
| G385869 | NA | other | upstream | 223695 | 1200356 ~ 1209651 (-) |
