G385526


Basic Information

Item Value
gene id G385526
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000195
NCBI id null
chromosome length 1404554
location 121186 ~ 121992 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU441020
TGAAACTCAGAATTATTTACAGCACTTTCAAAATCACTGAATTCTGACTCTTTCAGGATTTGTGACATTAGCTGGGTGACTTCAGCTAGGGACATATCATAGAGCTTCATTTTCCTGGACAACTCTGTCCTAAACTCAGAAAAATTTCTCTGCACTGATGGCAAACTCTCAGCAAGTCTTTCTATGTCTTCAGGACCTAGAGCTGTACTGACTGCTTGTAACTGGAGTATGGGGGTTACAGATGTAACTGTGTCAACACCTTTTACCCTACTCTAAGCCTTTTGTCTCGCTCCACACACTTCAACTGCATTTACATCTTTATCCATGAATCCAGTATTGCTATTGCCCTCTAGTCTACAGAAAGACTCTAAGTCAGGATAGCTTTCATCTGACTGTTGGTCTTTTGAGTCACATTTGGTTGAGGCTTTGTTAAGGCCCAACTTCTGCGTGAGACGAGACACTCGAGTGTGCAACTGTTTGTTCTGCTTTTCTAACTTAGCAATACGTTGGATTTGTTCTTGTGCAATGGATAGAGTAAATTCTCTGTGGCAGCAGATAATGCCCTTCTTATTTTTCTTCCGAATACAAGCACCAAGTACCTTTTTGCATTCTTCAATAGACCAAACTTTTTCTGGATGAATCCCAAATTTCTTTGTCAAATCCAATCTGACTGATTCAGTCACTATTGAGTCCATGTGCTTTCCTAA
>TU441018
CTGTACACAACTAGTGATCTTTGACCAGTCCACCTTTGGTCCAACAAGGTTCTGTAACACTCTCAGAACTCCTTCTCTCAGTTCACCTTTGCTGGAATGCTGAAACTCAGAATTATTTACAGCACTTTCAAAATCACTGAATTCTGACTCTTTCAGGATTTGTGACATTAGCTGGGTGACTTCAGCTAGGGACATATCATAGAGCTTCATTTTCCTGGACAACTCTGTCCTAAACTCAGAAAAATTTCTCTGCACTGATGGCAAACTCTCAGCAAGTCTTTCTATGTCTTCAGGACCTAGAGCTGTACTGACTGCTTGTAACTGGAGTATGGGGGTTACAGATGTAACTGTGTCAACACCTTTTACCCTACTCTAAGCCTTTTGTCTCGCTCCACACACTTCAACTGCATTTACATCTTTATCCATGAATCCAGTATTGCTATTGCCCTCTAGTCTACAGAAAGACTCTAAGTCAGGATAGCTTTCATCTGACTGTTGGTCTTTTGAGTCACATTTGGTTGAGGCTTTGTTAAGGCCCAACTTCTGCGTGAGACGAGACACTCGAGTGTGCAACTGTTTGTTCTGCTTTTCTAACTTAGCAATACGTTGGATTTGTTCTTGTGCAATGGATAGAGTAAATTCTCTGTGGCAGCAGATAATGCCCTTCTTATTTTTCTTCCGAATACAAGCACCAAGTACCTTTTTGCATTCTTCAATAGACCAAACTTTTTCTGGATGAATCCCAAATTTCTTTGT
>TU441019
TGAAACTCAGAATTATTTACAGCACTTTCAAAATCACTGAATTCTGACTCTTTCAGGATTTGTGACATTAGCTGGGTGACTTCAGCTAGGGACATATCATAGAGCTTCATTTTCCTGGACAACTCTGTCCTAAACTCAGAAAAATTTCTCTGCACTGATGGCAAACTCTCAGCAAGTCTTTCTATGTCTTCAGGACCTAGAGCTGTACTGACTGCTTGTAACTGGAGTATGGGGGTTACAGATGTAACTGTGTCAACACCTTTTACCCTACTCTAAGCCTTTTGTCTCGCTCCACACACTTCAACTGCATTTACATCTTTATCCATGAATCCAGTATTGCTATTGCCCTCTAGTCTACAGAAAGACTCTAAGTCAGGATAGCTTTCATCTGACTGTTGGTCTTTTGAGTCACATTTGGTTGAGGCTTTGTTAAGGCCCAACTTCTGCGTGAGACGAGACACTCGAGTGTGCAACTGTTTGTTCTGCTTTTCTAACTTAGCAATACGTTGGATTTGTTCTTGTGCAATGGATAGAGTAAATTCTCTGTGGCAGCAGATAATGCCCTTCTTATTTTTCTTCCGAATACAAGCACCAAGTACCTTTTTGCATTCTTCAATAGACCAAACTTTTTCTGGATGAATCCCAAATTTCTTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU441020 False 707 lncRNA 0.40 1 121186 121892
TU441018 False 756 lncRNA 0.41 1 121237 121992
TU441019 True 656 lncRNA 0.40 1 121237 121892

Neighbor

gene id symbol gene type direction distance location
CI01000195_00109629_00111249 NA coding downstream 7922 108141 ~ 113264 (-)
CI01000195_00132902_00133243 NA coding upstream 8891 130473 ~ 133243 (-)
CI01000195_00170752_00172146 NA coding upstream 47737 169729 ~ 172378 (-)
CI01000195_00230161_00241109 NA coding upstream 107111 229103 ~ 242123 (-)
CI01000195_00267729_00269461 NA coding upstream 145355 267347 ~ 269653 (-)
CI01000195_00277321_00278413 NA coding upstream 154882 276874 ~ 278738 (-)
G385076 NA non-coding downstream 17823 103160 ~ 103363 (-)
G385056 NA non-coding downstream 73968 46858 ~ 47218 (-)
G385534 NA non-coding upstream 1371 123363 ~ 123846 (-)
G385529 NA non-coding upstream 66630 188622 ~ 194606 (-)
G385523 NA non-coding upstream 105476 227468 ~ 274671 (-)
G385531 NA non-coding upstream 154292 276284 ~ 281648 (-)
G385070 NA other downstream 23667 97058 ~ 97519 (-)
G385869 NA other upstream 1078364 1200356 ~ 1209651 (-)

Expression


Co-expression Network