Item | Value |
---|---|
gene id | G385529 |
gene name | NA |
gene type | non-coding |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000195 |
NCBI id | null |
chromosome length | 1404554 |
location | 188622 ~ 194606 (-) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
id | name | namespace |
---|---|---|
GO:0016071 | mRNA metabolic process | biological_process |
GO:0000375 | RNA splicing, via transesterification reactions | biological_process |
GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | biological_process |
GO:0006397 | mRNA processing | biological_process |
GO:0000398 | mRNA splicing, via spliceosome | biological_process |
GO:0016607 | nuclear speck | cellular_component |
GO:0005681 | spliceosomal complex | cellular_component |
GO:0005685 | U1 snRNP | cellular_component |
id | description |
---|---|
ko03040 | Spliceosome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU441025 | True | 463 | lncRNA | 0.53 | 2 | 188622 | 194606 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000195_00170752_00172146 | NA | coding | downstream | 16244 | 169729 ~ 172378 (-) |
CI01000195_00132902_00133243 | NA | coding | downstream | 55379 | 130473 ~ 133243 (-) |
CI01000195_00109629_00111249 | NA | coding | downstream | 75358 | 108141 ~ 113264 (-) |
CI01000195_00230161_00241109 | NA | coding | upstream | 34497 | 229103 ~ 242123 (-) |
CI01000195_00267729_00269461 | NA | coding | upstream | 72741 | 267347 ~ 269653 (-) |
CI01000195_00277321_00278413 | NA | coding | upstream | 82268 | 276874 ~ 278738 (-) |
CI01000195_00286609_00287289 | NA | coding | upstream | 91761 | 286367 ~ 287315 (-) |
CI01000195_00375179_00378443 | NA | coding | upstream | 179593 | 374199 ~ 378443 (-) |
G385534 | NA | non-coding | downstream | 64776 | 123363 ~ 123846 (-) |
G385526 | NA | non-coding | downstream | 66630 | 121186 ~ 121992 (-) |
G385076 | NA | non-coding | downstream | 85259 | 103160 ~ 103363 (-) |
G385056 | NA | non-coding | downstream | 141404 | 46858 ~ 47218 (-) |
G385523 | NA | non-coding | upstream | 32862 | 227468 ~ 274671 (-) |
G385531 | NA | non-coding | upstream | 81678 | 276284 ~ 281648 (-) |
G385599 | NA | non-coding | upstream | 153616 | 348222 ~ 353014 (-) |
G385632 | NA | non-coding | upstream | 191386 | 385992 ~ 388235 (-) |
G385656 | NA | non-coding | upstream | 224479 | 419085 ~ 419843 (-) |
G385070 | NA | other | downstream | 91103 | 97058 ~ 97519 (-) |
G385869 | NA | other | upstream | 1005750 | 1200356 ~ 1209651 (-) |