G385609


Basic Information

Item Value
gene id G385609
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000195
NCBI id null
chromosome length 1404554
location 913541 ~ 915824 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU441170
CCAGCTTTATTAAAGAAAAGTATTCAGATAATGCAGTGAGTGAAGGACTTTATTTATCTGTTATGTCAAGACAATATCATGACTATATACAGTGCACAGCATAAATGAGTACACCCTCTCTGAAACTTCTGAAAGTCAGCAATTACTCAGTTACTTAGAAGACATGTTAGGGTTCTTTAGAGATATAATGTTCCAGCAAGTCTGCTTAATCAATTACCAAAGAAGCATGTCAAAATTATTCAGGAAAATAAGATTTTTTATCAAGGTGATAAAATGTTGTGTAGCAAAAATGAGAACACCCTTCTAAAAGTTACTAAATAAAACAAAATAAAAATTTTCTGGTGTAAGTTTAAGGCAATGTTTGATCAATAGGTAAGTATGTTGAACCAAAACATTTAAAGAGAAATAATTTCTTGACAATTAAAAGTGTTATATAGCCCACTGAATCATTCTCAGACTTAATGCTGACAACAATGGAACCACTTGGGAAAGAACTGTCAGGAGACTTATTTTGTTAGCACAGAAGAGGACAGTGGTACAAGAGGATTACCAAATCATTGTTTTAAGTGTGAAAATATAGCAAAAGTAACACAGAAATTCAAAAACAATGGACTTGTGAAAAGGCCCCCTGAAATAATCAGGCCTTCATTTTAAGCTTTCATTTAGTGATGAGGGATTTTTTTTGCTAGACAAAGAGCAGGAGAAATACCAAGCGAGTGTCTCAGAGCCAGTAAAAGCTATGAAAAGAGTGACTGTTTATCTCACAGAGTAAGATGCAGCCTGCAGAAATGACATGCATGGTTGTTGTTCTCACTGGAACTACCTACTGTAGCCAAAGCACAATAAAGTCAGTTAGCCATTTCCAAAGCCCATATTTACAAAATATAGATTCTGGGAATCAATACTCTGGTCTCATGAGGCCAAATCAATCATTTTGGATCTAACAGCATCCAAAATGTTATGGTGTTGCTAGAGGAGGAGTACAGTGAAAAGTGCCTGTTTCCCACAATAAAGTTCAGTGGTAGTAAAGCTCTTATATAGGGATGTATGAGTGCTGAAGATGTGAGGAAGTTGTGCTTTATCAATGTTGTCATGAATTCCCACAACACTGTGTAATTTAATACATAAACTTGAAACAGATGATGTTACCCTTTCCTCATTCCCTGCATTGCTGGGCATTTTTTCAACATGACATTGAAGATATGCATTCTCCCAAGGTGAAAAACCTTCTGTGGACATGTATTGCACTCAATCTTAACACTCTTGAGCGCCTGTGGGGGATTCTGTAGAGACGAGTTGAGCAACACTCCCCATTAAAGATCAGGGCATTTAAGGAGCTCATCATCCAGGAGTTAAAACAGGACAGACGTGACAATTTGTCATGAACTTGTACACTCCGTGCCAAGAAGGGTCAGAGTAGTATATTCAAAATTATGGAGGGCATACTAAGTACTAGAATATTATACATTTGTTTAATTAAATCTAGGGTGTACTCATTTCTGCAATCCTTAATTTAAACAAAATTGGCTAATTTACTTATTTTATGGCTATTAATGACATATATTTCTCAGTTTTTATTATGTATATGTTTAATACATTTTAGTTTTTTCATCTTTCCATGAATTGTATTAGTGATCATAAAGAAAATACATCTTTTGTATTTGTTCAGAGGGGGTGTACTCATTTATGCTGTGAACTGTATATATATATATATATATATATATATATATATATATATATATATATCTTATATGGCTTTGTTAATATTTTGTGCAAATTTGTTTAAGGTACATGGTTTTTATAGATATTACATATACCTCAATTGAAGAACCTTTGGTAACAAGTTAACATAATTGTAACAGTGCTCTGTCTTACAGCTCATTGGTCATTAATGAAATATAGAGATAGAATAGCTATAAATGTTGCTGAAGAGGCATGTTAGAGACAATGACACAGGTTCATTTCTGTTGTGGAGGAGACCCAGAGTGGCCGTCGCTCAAGCAGCAGGACAGGTGCCCACACCGACTGCACCGGTGACCAGCGCTGCCTTACTGAAGCTCACAGGAGACTCATTCACAGACACGTTCCTCATGCAGCCTGTGTAGCCCCTCTTGATGTGGAGACTGTGAGACAGCATGGAGTCTGGAGAAGAGAAAAAGGTCAAAAACATTTAGGATCAACAATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU441170 True 2186 lncRNA 0.36 2 913541 915824

Neighbor

gene id symbol gene type direction distance location
CI01000195_00823303_00824935 MARCKS coding downstream 88053 822929 ~ 825488 (-)
CI01000195_00781053_00802555 CEBPZ coding downstream 110986 780858 ~ 802555 (-)
CI01000195_00540011_00558639 NA coding downstream 354902 539412 ~ 558639 (-)
CI01000195_00473436_00498770 PLEKHG3 coding downstream 414771 473382 ~ 498770 (-)
CI01000195_00375179_00378443 NA coding downstream 535098 374199 ~ 378443 (-)
CI01000195_00947211_00947449 NA coding upstream 31179 947003 ~ 947449 (-)
CI01000195_00959548_00967537 NA coding upstream 42613 958437 ~ 967751 (-)
CI01000195_00972854_00976498 NA coding upstream 56524 972348 ~ 976713 (-)
CI01000195_00977328_00985633 NA coding upstream 61456 977280 ~ 985652 (-)
CI01000195_00989184_00990148 APOA4B.3, APOA4B.2, APOA4B.1 coding upstream 73017 988841 ~ 990313 (-)
G385730 NA non-coding downstream 209341 702339 ~ 704200 (-)
G385722 NA non-coding downstream 230262 680705 ~ 683279 (-)
G385709 NA non-coding downstream 267778 645237 ~ 645763 (-)
G385672 NA non-coding downstream 292159 620228 ~ 621382 (-)
G385617 NA non-coding downstream 446185 456033 ~ 467356 (-)
G385608 NA non-coding upstream 51512 967336 ~ 967390 (-)
G385854 NA non-coding upstream 144737 1060561 ~ 1061208 (-)
G385881 NA non-coding upstream 174484 1090308 ~ 1091004 (-)
G385887 NA non-coding upstream 185659 1101483 ~ 1101764 (-)
G385070 NA other downstream 816022 97058 ~ 97519 (-)
G385869 NA other upstream 284532 1200356 ~ 1209651 (-)

Expression


Co-expression Network