CI01000201_00254354_00285896


Basic Information

Item Value
gene id CI01000201_00254354_00285896
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000201
NCBI id null
chromosome length 704500
location 254115 ~ 286062 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000201_00254354_00285896.mRNA
CCATAAAACGGCGCGCATATTCATCGATTCCTAAAAGGCAGGGAAAAAACGTCCTTGCATCAGTGAAAACCGCGCAGATAATCCCGCACACAATAATCTCGATGCTCTGATCGATTCCAGCGTCTTGATGTGTGTCTTGCTCGATTCAGCTCTATTGGGTTTGTGTCGAATGAGAACCTCAGCGGCTGCGGACTGACCGACTGCATTAAACCTCACCGAGAGATTTACATGAGAGAAAAATGGAGAACTTCAGAAATGACAGGACACGGAGCCTTCAGAAAAGTGTTGTAAATGGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGTCAATCAGCATTAGGGGGCGTGTCCACTCATGATAGGGGAGGAGAGAGAGTGAGCCAATCAACAGTAGGGGGCGTGTCCACTCATGATGGGGGAGGAGAGAGAGTGAGCCAATCAGCATTAGAGGGCGTGTCTACTCATGATGGGGGAGGCGAGAGCCAATCAGTATTAGAGGGAGAAGATGAGAATAAGCAGCACTCAAGCAACTTATTTCACACGAGGAAGCCGAATGCTTCTTATGTTCCACAAGACAAAATATATAGTCTGGATAAAGCCTATCAGATTTCCCTGGAGAGAGACTACTGGAATATTCCTATATTGGATTATCTGCAGGAGCCGGAGAAGCTACTGCAGCGAGTGGCCGTATCCATCTTCTCGAGAAGAGCTCTTGATTGTCACATCCAGTTATTTAAATTGCCTTCGAGAGGCCAGGACCTGGAATGGAACAATATCCTTTGGCTTTGCTTCCCTGGCTCCGGCGCTTCTCATTTATTTTTATGCGGAGCTGAGACAGCGCTTTGGCACCTTTCCACCGTGAAGGTAGTCCAGAGGAGCCCGACTCCTGAAGCCGTCGAGAATGAAGAAGTTTCGCGTGAGATTAGACAGCGAGCGGCGCTGGGATGGAGCCAGGCTGATAATGGAGCGATTGGCTGCAGAACAGACCTGAAAAACTGAGCTCAATGTGATTCTGGCAGCAACTCAATATTTATTATCCATTAGACGATATCCAGTATCACCATATTTATGTATCTGTCCTGAAATGGCTTAAAAGAGTGCTTTTTTCCAGTCCGAGGGACATTAATCATTGTCATTCATATACACTAATATAACAATCACATTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000201_00254354_00285896.mRNA True 1626 mRNA 0.49 5 254115 286062

Neighbor

gene id symbol gene type direction distance location
CI01000201_00124616_00139299 NA coding upstream 114588 124616 ~ 139527 (+)
CI01000201_00098073_00121392 NA coding upstream 132321 98017 ~ 121794 (+)
CI01000201_00066137_00066334 NA coding upstream 187668 63803 ~ 66447 (+)
CI01000201_00043840_00048171 NA coding upstream 205535 43780 ~ 48580 (+)
CI01000201_00394321_00396791 NA coding downstream 108090 394152 ~ 396995 (+)
CI01000201_00421647_00426906 TBL1X coding downstream 134524 420586 ~ 426906 (+)
CI01000201_00473896_00474283 NA coding downstream 187834 473896 ~ 474436 (+)
CI01000201_00547876_00556142 GPM6BB, GPM6B coding downstream 261814 547876 ~ 556255 (+)
CI01000201_00572895_00575129 TRAPPC2 coding downstream 286657 572719 ~ 575704 (+)
G387650 NA non-coding upstream 98389 154840 ~ 155726 (+)
G387615 NA non-coding upstream 109324 144084 ~ 144791 (+)
G387629 NA non-coding upstream 150066 47560 ~ 104049 (+)
G387804 NA non-coding downstream 36760 322822 ~ 354650 (+)
G387807 NA non-coding downstream 54125 340187 ~ 385102 (+)
G387838 NA non-coding downstream 120151 406213 ~ 406445 (+)
G387848 NA non-coding downstream 203343 489405 ~ 489702 (+)
G387849 NA non-coding downstream 212724 498786 ~ 527371 (+)

Expression


Co-expression Network