G387739


Basic Information

Item Value
gene id G387739
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000201
NCBI id null
chromosome length 704500
location 234891 ~ 268792 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU443767
CAATAATCTGCTGTGAAAAGAGCCCAACTTCAGGTTTATAATGAATTACAAGCATTTAAGTTCAGATCTGCGACAGACAGTTAACAGGTTAATGATTTATCCAGTATTTTAAGAACATTTAACTCTTTAACCCGCCATTGACAATCCATGTTTTCACTGTTAAACGGTAGGGGGCGCTATTACACATCTTCTGAAAGAGTACAGAATCTCCAGATCAAAACACAGGTGAAGAAGAATTAGAAACAAGAGATAGAAGCATTGCTGACGCACATAAATGACACGATCATCAAACATCAAAAATGCCTTACGTTACCAAATTAAATGTTGAACCATGAAGAGGAAATGACTGTGAAGTTTTGGAGCTCTTGATGGACTCGATCTATTCCCCTAAATCAACACTCCCATCCAGCTGGGATGTTCTAGTACTGGCAACTGCTTTTAAAAATTGCTGGCAAGGAAAGGGTTAAATGCATTGACTAGGAAGCCTGAATCTTGCTATCACATGAACCCTCCATATACATCCACCCTGTATGTTTTCATGCTCCAATTGCAAAACCTCAGATGTATTTGTGTTTCTGTGGTCCGTGAGTGACCACAGATGGTTGCAGTGCCACAAACTGAGCGAGAGCATGCAGTTACTGCTCCTGTCACTGGAGAAGCTGCAGCTCCACCATCTGTCATCAGGAGCCGTCTCAGGCAATGTGACGAAGACCAAGGTTTACCTGCACAAACACATTTGCTTTGTGTTCAACGCGTCATGTAATCTCCACATGAAACGTGTCGGAGCATCACATCAGTGATTTTACAATGTAGCAAGACAGAAGTGTGAAGGTAAACAGTGTAAACATGCATAAACAGAAAGAAATGGAAGCAAAAACTGCTATTTATACACTAGAGCTGCATTAACTAAAATATCCCATATATATACAAACATGAAAAGTGAGTGAGCAAATGAGTAAAATCTAAGTTTATTTAAGTTTAGAAAAAGCAGCAAAAAGTCTCTTACATATACAGTATCCATCATGTTTCATACAGCGTAAAGTATGGAAAGATTTAAAGAAGCAACATGATTGAAACATGTACATGTCCATCAGTACCCTGTTAGGCAGATTAATATTGACCAATAATAATTACGGATCCTCTGGTGAAGCTTCGCTGGAGCTTGTGTGTCACTTTGTTGCAGGGAAAGTAAAAATCATTAATTAATAATGTTCAAAACAGCTGAACAACGAAAAGAAAAAAAAAGTTTTATAAATCATAACGGAAGATAATTACAGGAACTGACAGTATGCAAACTTCCTGTTTACAAATTACAATCACTGGAAGCTGGACACTGAAATTTAGAACGATTTGCGAAAACATTTAAATCTGTTCTCACCGCAGCTCGTCTTTCTGGAAAACAACAAAATCACTTTAAAGTTGAAGCGTGTCATTTCTAAATGGCATGACATCATCAACCAATGACATGACATTTGGGGGCGGGGCTATCTGTTTGACTGACCAATGGCAGATGGGGAGTGTGTTCAGGAAAGCACTCATTACTTTTGCTATTCCATTTGATGCAGTTTCAAGCAGAAGGACATGAGTATATGGATCTATGGAACTATTTGTTTAATCCACTGTCACATAAATAATGTTTCGTAATGTTCAAACACAGAGGGATGAAGATGGCAAACGTACATTCAGAACTGTACACGAGCCAATGAGAAAATGTAATTGAAAGCAATACTACAAGCTGCAGATGTTCTTTTTACAATTTATTCTATATGCTATATACACTATGCACTAAAATAACACTATTCAGGCTGAGAAGGAGAATACATCAGATGATGTCTGATACGAGCTCTTAAAGGTGCTGTAAGCAATAGTTTAAATGGAATAATACATATACAATCTCTCTACAGCCTGACAGATATCAAAGAAACACGTGCTGTAAGAAATAAGAAGAAAAGAGTTTTAGCCAATCAGAAACGCTCTCCACCTGTCAATCATTGTGTGTGTTCTGTTGAAAGCACTTCCAGCACCTTTAAGATCTGACTGAAGATCCTCTCAGAGTTTCACACTGCAACCTGATCTCATGTTTAAAATGTAAGATGTGACTCTTGTGGATCCTCAAACAAGATTTTTCTCGAAATTACAAAGTATTCAAGCACTTTTTGAGTCACACTTAGAAAAACACTGGGAATGTGGTTAATTAAAGTTTCATTTGGCACAGAGACAAAATATTTTCAGAAATCCTCTTAAATGAGCCACAGTGATCAATGATCCCATAAACCACTGCTGCACATGACAGACAGAACTCACTCTAGAACAACAGAGGGAAATTCAAAGATTGACACTAGATAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATATAGACTGATGATAGATAGATAGATAGAGAGATAGATAGATAGATAGATAGATAGATAGATAAGATTGAACGAACTAATGATAGATAGATAGAATGAACGATAGATAGATAGATAGATTAGAATGAACGATAGATAGAATGAACGATAGATAGATAGATAGATAAGATTGAACGAACAAATAGATAAGATTGAACAAATGATAGATAGATAGATAGATAGATAGAACGGACAAATGATAGATAGATAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGACTGATAGATAGATAGATAGATAGATAGACTGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAAGATTGAACGGACAAATGATAGATAGATAGATAGATAGATAGATAGATATGATCGAACGAACAATTGATAGATAGATAGATAGATAAGATTGAACGAATAAATGATAGATAGATAGATAGATAGATAGATAGATGACATAGCAACCATCCAGAACACACTAGCAACCTCCCAGAATACTCTAACATCTGCATAGTAACACCCTAGCAACCACACAGTAACAAATGCCTTAGCAACTTGCATAGCAACATTCTAGCAACCACCCAGAATGCCCTAGCAACACCCTTGCAATGCCATAACAATACTCTAGCAACCACCCAGAATACCCTAGCGACTGCCTAGCAACACCATAGGAACAGCCTAGAAACTGCATAGCAACATTCTAGCAACCACCCAGTACACCCTAGTAACTGCCTATGAAAGCACTAGCAATGCCCTAGCAATTGCATAGCAACACTCCAACAACCACCCATAACACCCTTGCAACTGCCTGGCAACACCCTAGCAACTGCTTAGCAACACTCTAGCAACCATCCATAATACCCTAGCAAC
>TU443772
CAATAATCTGCTGTGAAAAGAGCCCAACTTCAGGTTTATAATGAATTACAAGCATTTAAGTTCAGATCTGCGACAGACAGTTAACAGGTTAATGATTTATCCAGTATTTTAAGAACATTTAACTCTTTAACCCGCCATTGACAATCCATGTTTTCACTGTTAAACGGTAGGGGGCGCTATTACACATCTTCTGAAAGAGTACAGAATCTCCAGATCAAAACACAGGTGAAGAAGAATTAGAAACAAGAGATAGAAGCATTGCTGACGCACATAAATGACACGATCATCAAACATCAAAAATGCCTTACGTTACCAAATTAAATGTTGAACCATGAAGAGGAAATGACTGTGAAGTTTTGGAGCTCTTGATGGACTCGATCTATTCCCCTAAATCAACACTCCCATCCAGCTGGGATGTTCTAGTACTGGCAACTGCTTTTAAAAATTGCTGGCAAGGAAAGGGTTAAATGCATTGACTAGGAAGCCTGAATCTTGCTATCACATGAACCCTCCATATACATCCACCCTGTATGTTTTCATGCTCCAATTGCAAAACCTCAGATGTATTTGTGTTTCTGTGGTCCGTGAGTGACCACAGATGGTTGCAGTGCCACAAACTGAGCGAGAGCATGCAGTTACTGCTCCTGTCACTGGAGAAGCTGCAGCTCCACCATCTGTCATCAGGAGCCGTCTCAGGCAATGTGACGAAGACCAAGGTTTACCTGCACAAACACATTTGCTTTGTGTTCAACGCGTCATGTAATCTCCACATGAAACGTGTCGGAGCATCACATCAGTGATTTTACAATGTAGCAAGACAGAAGTGTGAAGGTAAACAGTGTAAACATGCATAAACAGAAAGAAATGGAAGCAAAAACTGCTATTTATACACTAGAGCTGCATTAACTAAAATATCCCATATATATACAAACATGAAAAGTGAGTGAGCAAATGAGTAAAATCTAAGTTTATTTAAGTTTAGAAAAAGCAGCAAAAAGTCTCTTACATATACAGTATCCATCATGTTTCATACAGCGTAAAGTATGGAAAGATTTAAAGAAGCAACATGATTGAAACATGTACATGTCCATCAGTACCCTGTTAGGCAGATTAATATTGACCAATAATAATTACGGATCCTCTGGTGAAGCTTCGCTGGAGCTTGTGTGTCACTTTGTTGCAGGGAAAGTAAAAATCATTAATTAATAATGTTCAAAACAGCTGAACAACGAAAAGAAAAAAAAAGTTTTATAAATCATAACGGAAGATAATTACAGGAACTGACAGTATGCAAACTTCCTGTTTACAAATTACAATCACTGGAAGCTGGACACTGAAATTTAGAACGATTTGCGAAAACATTTAAATCTGTTCTCACCGCAGCTCGTCTTTCTGGAAAACAACAAAATCACTTTAAAGTTGAAGCGTGTCATTTCTAAATGGCATGACATCATCAACCAATGACATGACATTTGGGGGCGGGGCTATCTGTTTGACTGACCAATGGCAGATGGGGAGTGTGTTCAGGAAAGCACTCATTACTTTTGCTATTCCATTTGATGCAGTTTCAAGCAGAAGGACATGAGTATATGGATCTATGGAACTATTTGTTTAATCCACTGTCACATAAATAATGTTTCGTAATGTTCAAACACAGAGGGATGAAGATGGCAAACGTACATTCAGAACTGTACACGAGCCAATGAGAAAATGTAATTGAAAGCAATACTACAAGCTGCAGATGTTCTTTTTACAATTTATTCTATATGCTATATACACTATGCACTAAAATAACACTATTCAGGCTGAGAAGGAGAATACATCAGATGATGTCTGATACGAGCTCTTAAAGGTGCTGTAAGCAATAGTTTAAATGGAATAATACATATACAATCTCTCTACAGCCTGACAGATATCAAAGAAACACGTGCTGTAAGAAATAAGAAGAAAAGAGTTTTAGCCAATCAGAAACGCTCTCCACCTGTCAATCATTGTGTGTGTTCTGTTGAAAGCACTTCCAGCACCTTTAAGATCTGACTGAAGATCCTCTCAGAGTTTCACACTGCAACCTGATCTCATGTTTAAAATGTAAGATGTGACTCTTGTGGATCCTCAAACAAGATTTTTCTCGAAATTACAAAGTATTCAAGCACTTTTTGAGTCACACTTAGAAAAACACTGGGAATGTGGTTAATTAAAGTTTCATTTGGCACAGAGACAAAATATTTTCAGAAATCCTCTTAAATGAGCCACAGTGATCAATGATCCCATAAACCACTGCTGCACATGACAGACAGAACTCACTCTAGAACAACAGAGGGAAATTCAAAGATTGACACTAGATAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATATAGACTGATGATAGATAGATAGATAGAGAGATAGATAGATAGATAGATAGATAGATAGATAAGATTGAACGAACTAATGATAGATAGATAGAATGAACGATAGATAGATAGATAGATTAGAATGAACGATAGATAGAATGAACGATAGATAGATAGATAGATAAGATTGAACGAACAAATAGATAAGATTGAACAAATGATAGATAGATAGATAGATAGATAGAACGGACAAATGATAGATAGATAGATAGATAGACTGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAAGATTGAACGGACAAATGATAGATAGATAGATAGATAGATAGATAGATATGATCGAACGAACAATTGATAGATAGATAGATAGATAAGATTGAACGAATAAATGATAGATAGATAGATAGATAGATAGATAGATGACATAGCAACCATCCAGAACACACTAGCAACCTCCCAGAATACTCTAACATCTGCATAGTAACACCCTAGCAACCACACAGTAACAAATGCCTTAGCAACTTGCATAGCAACATTCTAGCAACCACCCAGAATGCCCTAGCAACACCCTTGCAATGCCATAACAATACTCTAGCAACCACCCAGAATACCCTAGCGACTGCCTAGCAACACCATAGGAACAGCCTAGAAACTGCATAGCAACATTCTAGCAACCACCCAGTACACCCTAGTAACTGCCTATGAAAGCACTAGCAATGCCCTAGCAATTGCATAGCAACACTCCAACAACCACCCATAACACCCTTGCAACTGCCTGGCAACACCCTAGCAACTGCTTAGCAACACTCTAGCAACCATCCATAATACCCTAGCAAC
>TU443774
CAATAATCTGCTGTGAAAAGAGCCCAACTTCAGGTTTATAATGAATTACAAGCATTTAAGTTCAGATCTGCGACAGACAGTTAACAGGTTAATGATTTATCCAGTATTTTAAGAACATTTAACTCTTTAACCCGCCATTGACAATCCATGTTTTCACTGTTAAACGGTAGGGGGCGCTATTACACATCTTCTGAAAGAGTACAGAATCTCCAGATCAAAACACAGGTGAAGAAGAATTAGAAACAAGAGATAGAAGCATTGCTGACGCACATAAATGACACGATCATCAAACATCAAAAATGCCTTACGTTACCAAATTAAATGTTGAACCATGAAGAGGAAATGACTGTGAAGTTTTGGAGCTCTTGATGGACTCGATCTATTCCCCTAAATCAACACTCCCATCCAGCTGGGATGTTCTAGTACTGGCAACTGCTTTTAAAAATTGCTGGCAAGGAAAGGGTTAAATGCATTGACTAGGAAGCCTGAATCTTGCTATCACATGAACCCTCCATATACATCCACCCTGTATGTTTTCATGCTCCAATTGCAAAACCTCAGATGTATTTGTGTTTCTGTGGTCCGTGAGTGACCACAGATGGTTGCAGTGCCACAAACTGAGCGAGAGCATGCAGTTACTGCTCCTGTCACTGGAGAAGCTGCAGCTCCACCATCTGTCATCAGGAGCCGTCTCAGGCAATGTGACGAAGACCAAGGTTTACCTGCACAAACACATTTGCTTTGTGTTCAACGCGTCATGTAATCTCCACATGAAACGTGTCGGAGCATCACATCAGTGATTTTACAATGTAGCAAGACAGAAGTGTGAAGGTAAACAGTGTAAACATGCATAAACAGAAAGAAATGGAAGCAAAAACTGCTATTTATACACTAGAGCTGCATTAACTAAAATATCCCATATATATACAAACATGAAAAGTGAGTGAGCAAATGAGTAAAATCTAAGTTTATTTAAGTTTAGAAAAAGCAGCAAAAAGTCTCTTACATATACAGTATCCATCATGTTTCATACAGCGTAAAGTATGGAAAGATTTAAAGAAGCAACATGATTGAAACATGTACATGTCCATCAGTACCCTGTTAGGCAGATTAATATTGACCAATAATAATTACGGATCCTCTGGTGAAGCTTCGCTGGAGCTTGTGTGTCACTTTGTTGCAGGGAAAGTAAAAATCATTAATTAATAATGTTCAAAACAGCTGAACAACGAAAAGAAAAAAAAAGTTTTATAAATCATAACGGAAGATAATTACAGGAACTGACAGTATGCAAACTTCCTGTTTACAAATTACAATCACTGGAAGCTGGACACTGAAATTTAGAACGATTTGCGAAAACATTTAAATCTGTTCTCACCGCAGCTCGTCTTTCTGGAAAACAACAAAATCACTTTAAAGTTGAAGCGTGTCATTTCTAAATGGCATGACATCATCAACCAATGACATGACATTTGGGGGCGGGGCTATCTGTTTGACTGACCAATGGCAGATGGGGAGTGTGTTCAGGAAAGCACTCATTACTTTTGCTATTCCATTTGATGCAGTTTCAAGCAGAAGGACATGAGTATATGGATCTATGGAACTATTTGTTTAATCCACTGTCACATAAATAATGTTTCGTAATGTTCAAACACAGAGGGATGAAGATGGCAAACGTACATTCAGAACTGTACACGAGCCAATGAGAAAATGTAATTGAAAGCAATACTACAAGCTGCAGATGTTCTTTTTACAATTTATTCTATATGCTATATACACTATGCACTAAAATAACACTATTCAGGCTGAGAAGGAGAATACATCAGATGATGTCTGATACGAGCTCTTAAAGGTGCTGTAAGCAATAGTTTAAATGGAATAATACATATACAATCTCTCTACAGCCTGACAGATATCAAAGAAACACGTGCTGTAAGAAATAAGAAGAAAAGAGTTTTAGCCAATCAGAAACGCTCTCCACCTGTCAATCATTGTGTGTGTTCTGTTGAAAGCACTTCCAGCACCTTTAAGATCTGACTGAAGATCCTCTCAGAGTTTCACACTGCAACCTGATCTCATGTTTAAAATGTAAGATGTGACTCTTGTGGATCCTCAAACAAGATTTTTCTCGAAATTACAAAGTATTCAAGCACTTTTTGAGTCACACTTAGAAAAACACTGGGAATGTGGTTAATTAAAGTTTCATTTGGCACAGAGACAAAATATTTTCAGAAATCCTCTTAAATGAGCCACAGTGATCAATGATCCCATAAACCACTGCTGCACATGACAGACAGAACTCACTCTAGAACAACAGAGGGAAATTCAAAGATTGACACTAGATAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATATAGACTGATGATAGATAGATAGATAGAGAGATAGATAGATAGATAGATAGATAGATAGATAAGATTGAACGAACTAATGATAGATAGATAGAATGAACGATAGATAGATAGATAGATTAGAATGAACGATAGATAGAATGAACGATAGATAGATAGATAGATAAGATTGAACGAACAAATAGATAAGATTGAACAAATGATAGATAGATAGATAGATAGATAGAACGGACAAATGATAGATAGATAGACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGACTGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAAGATTGAACGGACAAATGATAGATAGATAGATAGATAGATAGATAGATATGATCGAACGAACAATTGATAGATAGATAGATAGATAAGATTGAACGAATAAATGATAGATAGATAGATAGATAGATAGATAGATGACATAGCAACCATCCAGAACACACTAGCAACCTCCCAGAATACTCTAACATCTGCATAGTAACACCCTAGCAACCACACAGTAACAAATGCCTTAGCAACTTGCATAGCAACATTCTAGCAACCACCCAGAATGCCCTAGCAACACCCTTGCAATGCCATAACAATACTCTAGCAACCACCCAGAATACCCTAGCGACTGCCTAGCAACACCATAGGAACAGCCTAGAAACTGCATAGCAACATTCTAGCAACCACCCAGTACACCCTAGTAACTGCCTATGAAAGCACTAGCAATGCCCTAGCAATTGCATAGCAACACTCCAACAACCACCCATAACACCCTTGCAACTGCCTGGCAACACCCTAGCAACTGCTTAGCAACACTCTAGCAACCATCCATAATACCCTAGCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU443767 False 3341 lncRNA 0.37 2 234891 268792
TU443772 False 3245 lncRNA 0.37 4 234891 268792
TU443774 True 3305 lncRNA 0.37 3 234891 268792

Neighbor

gene id symbol gene type direction distance location
CI01000201_00124616_00139299 NA coding upstream 95364 124616 ~ 139527 (+)
CI01000201_00098073_00121392 NA coding upstream 113097 98017 ~ 121794 (+)
CI01000201_00066137_00066334 NA coding upstream 168444 63803 ~ 66447 (+)
CI01000201_00043840_00048171 NA coding upstream 186311 43780 ~ 48580 (+)
CI01000201_00394321_00396791 NA coding downstream 125360 394152 ~ 396995 (+)
CI01000201_00421647_00426906 TBL1X coding downstream 151794 420586 ~ 426906 (+)
CI01000201_00473896_00474283 NA coding downstream 205104 473896 ~ 474436 (+)
CI01000201_00547876_00556142 GPM6BB, GPM6B coding downstream 279084 547876 ~ 556255 (+)
CI01000201_00572895_00575129 TRAPPC2 coding downstream 303927 572719 ~ 575704 (+)
G387650 NA non-coding upstream 79165 154840 ~ 155726 (+)
G387615 NA non-coding upstream 90100 144084 ~ 144791 (+)
G387629 NA non-coding upstream 130842 47560 ~ 104049 (+)
G387804 NA non-coding downstream 54030 322822 ~ 354650 (+)
G387807 NA non-coding downstream 71395 340187 ~ 385102 (+)
G387838 NA non-coding downstream 137421 406213 ~ 406445 (+)
G387848 NA non-coding downstream 220613 489405 ~ 489702 (+)
G387849 NA non-coding downstream 229994 498786 ~ 527371 (+)

Expression


Co-expression Network