G387741


Basic Information

Item Value
gene id G387741
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000201
NCBI id null
chromosome length 704500
location 240952 ~ 288532 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU443781
CATATTCTCAATTGTTCAGCTCCTCTCTTCCCAGTCTGTCAGTAACGCTCTGTTTAGTTCCTGTCTCTATGAAGCCCCTCCTTCTGAAAAGCACAATGTGCTCTGATTGGTCGACTGGAGCAGTGTGTTGTGATTGGTGTTTGGGAAATGTCCCGCCCCTTACCATAACCGCCAGTTTCAATACACTACTAACTAACTCAACCAGGCCCCGCCCCTTTATTCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU443781 True 225 lncRNA 0.48 2 240952 288532

Neighbor

gene id symbol gene type direction distance location
CI01000201_00124616_00139299 NA coding upstream 101425 124616 ~ 139527 (+)
CI01000201_00098073_00121392 NA coding upstream 119158 98017 ~ 121794 (+)
CI01000201_00066137_00066334 NA coding upstream 174505 63803 ~ 66447 (+)
CI01000201_00043840_00048171 NA coding upstream 192372 43780 ~ 48580 (+)
CI01000201_00394321_00396791 NA coding downstream 105620 394152 ~ 396995 (+)
CI01000201_00421647_00426906 TBL1X coding downstream 132054 420586 ~ 426906 (+)
CI01000201_00473896_00474283 NA coding downstream 185364 473896 ~ 474436 (+)
CI01000201_00547876_00556142 GPM6BB, GPM6B coding downstream 259344 547876 ~ 556255 (+)
CI01000201_00572895_00575129 TRAPPC2 coding downstream 284187 572719 ~ 575704 (+)
G387650 NA non-coding upstream 85226 154840 ~ 155726 (+)
G387615 NA non-coding upstream 96161 144084 ~ 144791 (+)
G387629 NA non-coding upstream 136903 47560 ~ 104049 (+)
G387804 NA non-coding downstream 34290 322822 ~ 354650 (+)
G387807 NA non-coding downstream 51655 340187 ~ 385102 (+)
G387838 NA non-coding downstream 117681 406213 ~ 406445 (+)
G387848 NA non-coding downstream 200873 489405 ~ 489702 (+)
G387849 NA non-coding downstream 210254 498786 ~ 527371 (+)

Expression


Co-expression Network