G387834


Basic Information

Item Value
gene id G387834
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000201
NCBI id null
chromosome length 704500
location 625948 ~ 629376 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU443903
TATGTTGTCATGAAATCTGCACATAAAAGAATTAGAAAAATGATGTTTTAAAAATAATAATGAGTAGAAGAAGAATTATTATTTTGATGTGGTCATGAAATCTGTACACATAATAAATAATAGAATTAGCAAAATGCTGTTTTAGTCTGAGGACAAGCCAACTTTCCAAAAGTATGCCAAATACCCAGGAAAGAAAGTGTATTTGTCAATGAACTTCAACAAAAAAGTGGTTGTGTTTATTTACAGTTATATGGACATGAAAACGGAATCAAATCAACATTATATTAAAGGTTATATATTTCACTGTGGTCTTGAGACGGAAGCTTTGGAGTGTGTCCCAATCAATCACAGCGTTTCCTGGAAGAGTTTGTTGTACTGCCGACTGTCTGTGGACATGAGGCCTCTGAGACTGAACCAGAAGTACCTCTGTGCTTGAGGGTTCCTCGGCCACTCCAGGATTGATTTTTTATACAACCTCTTCCTCAGCTTGAGGTACTTGGAGTGACAAGGCATTTTCTCCAAGAATATCAGGACGATAACATCATTCCTCTCGTCCATGAGTCGCTGGTGGGCCAAATAAAACGCTGTCCTGAAGCTGCCGCTCCTGATGTACTGCCCCGTCAGGATGAAAACGGTGCGTTTACTCAACTGTATGCTCTGGGAAAGGTTTTCAATGAGGGGACAGCCAGGCACCCAATCCCGCTCCTCCAGACAGAGTTGCATCCGCGGATCGCCCCTGTCCTCCAGGTGAACGCGGAGCTCCTGCATGACCCACTCGTGAACGGCTGGATCCGTCGTGTCGTAGACCACGAAGGCGTCGTAGACGGTGCTGTTGGAGGACAGCCGGCGGTATCCCTTGAGTTTGGCCAAGCAGAAGTGGTAGATGTACCACACATCCCAGAGGAAGAGATGGCTGGAGATGGTGAGCGTGAGGATGCTAAGAATCACAGAGGTCAGGAAAATACACAGGATGATGGACAGGGAGTTGTGTTGGCAGGCCTGGACATTTAGGAAAATGACGCTTTGACCTTTTTGGGCACTCGGCGAAGAGCAGGTGACGTCCGTCGCGAGGCGCGGGATATTCACGGAGGTGCGGTTGATCCATCGGACGAACCACGTGGCGTTGCAAGAGCACACAAACCTGTTGTTGTTCAAGTACAAGGTCTCCAGGCGGTCAACAACATTTTCCGGGAAGCTCGATTCGTCGATGAACTGGATGCGGTTGTAACTGAGATCCAAGACCTTGAGGCTGAATGCATCCTTCAGGAAATTCGGAGTCAGTTTTGCAATGTTGTTCTTGTGTAGGACAAGAGTTTGGATTGATTTCGTGTAGTTAGTCAAGCACGCAGGAACCTCCGTCAGGTAATTCTCACTGAGGTCCAACAGCTGTAGGTTTTTAAGGTTCACAAGGCCTTCCCATTTAAATGACTTCAACCTGTTGTTAGTGATGTAGAGTTCTGTGAGGGTGTCTGGAAGACCTTCGAAAACACCTTGTGGGATGAAGTTCAGGTTGTTTTGAGAAATGTCAAGAGTCTTCAAGGCCACAAGTTTCTTAAAGTAGCTGACGTACCTCGTGTCTCCATCCCTCCACAACATATCAAGACGGTTGCCTCTAAACTCCAAATGTTCCAGAGTAAAACTCTCCATTTCGGTGTTCGTGGATGTGGATATCTGGTTGTCGTTCATGATTAACTTTCGCAGCTTAATCAGGCTTTTTGTAAAGTTCAACATGTGAGTTAAACCCTCAGCCACGAAGAAATGGCTGTTACGGCTGATATCCAGAATGATCAAGCTGCTCAGTTCCTGGAACGCTGAAGAGAACATCAAATCCAGACGATTGTCGGAAAAGTCTAGGTATTGTAAATTCTTCAACTGGACAAACTCAGAACCGTTCAAACTCTGGCTCATGGCGTTCCCGGAGAGATTTAAACACCTCAGCTCACCAAGATCCAGAAATCTGGAATGAAGGAAAAAGATGTTATTCCTGCTAATATCCAACGTTTTTCCAAAGGAACTACATTCGTTGTTGAAAGGACTTGTAATCCAGAGTTCCTTGTCTTTGTATTTGCAGCTGCGTGCAAATTCGTCATAGAGGAAATAGTGGATATCCTTCACTTCTCCATTGTGGTACTGGGCACCTTGCGACATTGGGGAACCATAATGTTTTTCTCTGTGGTTAGAATGCCAAGTCGTGTATCCTCCTTCAGAGGGCATTGAGATTTTGTTGTCGGACAAGTTGATGATTCTGAAGCTTTTCAGTTTCTTCAGGAGACTGAGGTTTGCTATTTTTATGAAGTTTGTGCCAAGGTCAATGAATTCCAGGTTGCTCAAATTAATCAATGGGTTGAGGTCTCGCTCGGTGAGTTCTTGAAACACGTACCCTCTGATTCTCAGGACCCTCAGAGATTTAAGGCGGCTGAATGATCTCGAAAGGTTGAGAGATGTGGGATACACCTGGAGCTCGAAGTTGAAAGACAGATCCAACTCTTCCAGATTGGGCAACAAAAAAGGAAAAGAGGTGCATGTTATCTCCTTAGCCAAAAAATTGCTTGAGAGGTCTAGAAGACTAAGGCCCGTCAGGTTTTGAAACCATTCTGAAGGTATATTCGTTAAAGAGTTGCTATGAAGTCGAAGAGTCTTGAGGTTCTTCAGGGTCTTGAAGGAGTTGGCGTGTATCTGAAGGGGAGCATTATTTGGGCATGGATTGCATGGGAACGGTGCATTATAACAGCGTGGACAATTCCCACTCAAGTCCAGTATTTCCAACTCTGTCAGGTTGTGAAAGTCCTCCTCCGTTATTGTGTGAATATTGTTGTTGTACAGATACAGCTCTTTGAGGCTAGATGGTAGTTGGCGCGGGACATAGGACAAGTTGTTAGACTTCAGAGAAAGCAAAGTCATCTTGTCGAGCTGCACAAACGCATCCTTTTCAATGTAGTATGACTTGTTGCACGGGTTCCGGAAGTAGCAGTTCTGGCCGAGATACAGCCTCTGGATATTAGTCAGCTCTGTCAGATTCTCCTTAAGAATTGAATAAATACTGTTGACCTCGAGACTCAGAAGCACTATGTTTGGAGGAAGGCCTTTGGGTATGCTGGAGAGCTGGTTACCATCCAGGTAAAGCGACTTGAGGTTCTTTAGCTTCCAGAAGGTTCCGTTGTCAATCGTGACGCTCTGGGTGCAGACGCGGTCTTTGGGACCGACCTTGATCGGCACACAGTTGCAGCGGAGGTCGATCTCAGTGATGTTGTGCAGTTCGTGGAATGAATCGTTCATGATGTGGGGTATGTGGTTGATGGTTAGTGTCAGGTTGGTGGTGTTCATTGGGATTCCCAGAGGAACTTCGGTTAGGTCTCGTTCGGTGCAGTTGACGCTGACCTCGGTCCCGTTACTAGCCAGAGAAACGTCACACTTCAGACTTTTGGGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU443903 True 3429 lncRNA 0.46 1 625948 629376

Neighbor

gene id symbol gene type direction distance location
CI01000201_00576577_00577506 NA coding upstream 47047 576577 ~ 578901 (+)
CI01000201_00572895_00575129 TRAPPC2 coding upstream 50244 572719 ~ 575704 (+)
CI01000201_00547876_00556142 GPM6BB, GPM6B coding upstream 69693 547876 ~ 556255 (+)
CI01000201_00473896_00474283 NA coding upstream 151512 473896 ~ 474436 (+)
CI01000201_00421647_00426906 TBL1X coding upstream 199042 420586 ~ 426906 (+)
G387876 NA non-coding upstream 1962 623775 ~ 623986 (+)
G387827 NA non-coding upstream 9080 614931 ~ 616868 (+)
G387819 NA non-coding upstream 12563 522909 ~ 613385 (+)
G387862 NA non-coding upstream 36474 588465 ~ 589474 (+)
G387849 NA non-coding upstream 98577 498786 ~ 527371 (+)
G387857 NA non-coding downstream 15169 644545 ~ 645170 (+)
G387881 NA non-coding downstream 32794 662170 ~ 663023 (+)

Expression


Co-expression Network