CI01000206_00426915_00452327


Basic Information

Item Value
gene id CI01000206_00426915_00452327
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000206
NCBI id null
chromosome length 757353
location 426794 ~ 453106 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000206_00426915_00452327.mRNA
GCATATAAGCTAGTAAAAGCAACATAAAACAGATTAATGATGTTATGATCACCAATTGGGACATATAGAATATACAGGTAAGTTGATGTGTTGGTAAGAACATCTGTCTCAGGAGGTGAGAATGGTTCACACCTGGACTGATTGTGATCAAACACTTGGGTTTATGGATCATTATGAGGTGATTCGGCGGGTCGGTCAGGGCGCGTTCGGGAGCGCGCTTCTGGTCAAACACCGACACGGAGACGATCCGCTGCTCTATGTCATCAAAGAGATCAACCTGAGACGGATTGTCGACTGGTTTGTTCAGATCTGTCTCGGACTGAAGCACATTCATGACAGGAAGGTCCTGCACAGAGACATTAAATCTCAGAACATCTTTCTCACTCAAGGAGGACTGAAAGTCAAACTGGGAGATTTTGGCATCGCAAGAATGTTGAACAACACCATGGAGCTCGCCAGAACCTGCGTTGGGACGCCGTACTATCTGTCTCCAGAGATCTGCGAGAACAGACCTTACAACAACAAAACGGACATCTGGTCTCTGGGCTGTGTCCTCTATGAGCTCTGCACACTGAGACATCCGTTTGAAAGCAGTAATTTAAAGCAGCTGGTGCTGAAGATCTGTAGGGGGCGCTACAGTCCAGTGTCTCAGCGCTACAGTAATGAACTACAACTGCTGCTTAACCAGCTGTTCAAGGTCAGTCCACGTGACCGGCCGTCGGCTAACTCGCTGCTCAAACGACCTTTACTACAGCCTCTGATCAGCAAACATCTGGACACACAGCAAATAAAGCCTCATTTTCCTGCTGTGGTTGAAAACCCGATTCCACTCAAACTACGTGTTGATCATGAGCGGCGGTGGAACGGTCCGGCCGAGCCGAACGAGCGTCAGGACCGACAGCAGGAACCTGCGGATCACGACGCACACAGACCCGCTGCGCTGGAGCCCCACAAAATCACAGACTGTGTGAAATCATTGATCATTTCTGGTGTTCAGGGTATCAGACCGTCCACAGCAGATGCTGAAGGCTGTCAGCCGGCCAACGCACAAGAGCATTATGGGAGCAGACCGCCTCAGAGAGGGAAACTACAGGGACAGGAGGAGTATCTGAAGCAGCTCCAGCGAATCAGAGAGCAGTATCATCATGATGTCAGAGAGATGAGAATGAGAGCAGAGGTCGAGGACAGAGGAGCAGACTTACTGAAGAAGAACAGAGACACACGCACACGTGGGAAAGAGCAGCAGAGAGGAATCATGTTCGAGATCAAGCTGAGTGATAAAGAGATGAAGACTGATGAGGAAGATGAGGAGTCAGAGGATGAGCCCCTGAACGACACACTGACGTTTGCACAAGGAGAAAACCTCCGCCACCGTCCACACGGCTCAGAGGAAGAGGCTCGGGTGAAGAGAGGCGAATGGTGTCGAGACGCCGCTGAGACCTTACTGAGCGCTCTGGAGCACATGGATGTGACGACGGAGAGCGTCTGTGACGCTCAGACAGAGGAGCAGGAGGAAGGAAACAGAAAACACTGGACGAAGCGTCTGCCGGAGACACTCCTGAACGCTCTCGCTCAAGCGCAGATCACCGACTGCAGCACAGAGACGCTGATGTCATCAGATGAGAAGCGTCTGACAGAGGAAGAGCGTGATGAAGATGAGTGTGATGAAGATGTGGATGAGGAGCGTTTGGAGCCTCGATCAGATGATGAGGACACGAACTTTGAAGAGTCTGAGGACGAGCTGAGAGAGGAGGTGTCCGACTCCATGAGGAACCTCCTCATCATCACACAGGAGGAGGACGAGCCGACGCACACGGATGGACCGACACAGGAAACACAGGAGGAAGCGACCAGCAGTGTGGAGGAAGTGACTGACAAGAGTGTGTTTCAACTGCCTTTTACTGCACATGATGATTACCAGAAAAACACAGTAGAATGAAGGGATTTTCTTTTCATTTTCTTTCTTTTTGTTCCTCATTCAAGTACGTCTAAGTGAGATCAAGCTTTTTCTGTAGCTGCTGCTAGAACAGTTTACCTTTTAACATCAGCACCTCTTGAATGTTTTTATATATTCACACACTACCGGTCAAAAGTCTGGAATAATCAAATTATTTTATTGTTTTTGAAAGAAGTGTCTTCTGCTCACCAAGGCTGCATTTATTTGAGCACAAATACAGTGAAAAGTATGATATATTATTACCATTTAAAACAGCTGTTTTCTATGTGAATATATAGTAAAGTGTAATTGATTCCTGTGATCAAAGCTGAATTTTCAGCATCATTACTCCAGTCTTCAGTGTCACATGATCCTTCAGAAATCATCATTTGCAGCTCAAGAAACATTTCTGATTATTTTCAGTGTTGAGCCGCTTCAGATTTGTGTTCAGACAGATGTTTCTCATTTAAACTTCAGAAGAAACTACTGAATTTACTGAGTCAGAGTGGGTTTGATTCATTGAAATTGATTCATGAACATGTTCATTCACATCATCACTGAAATCATGTGTCAATTTCATATATTAAAACGTTTTAATATATGATGGTAAAGACTGCTGTTCATGACTGTGTTATATTGGTGATGAATATAAATGAAAATGACTAAATATGATTCATGTGTTCATTTAGTGAAGAAATCATGATTATTTGAACTAGATTTTTTTTACTGTATTTTACTTCTTACATAAAACATTTTGAATCTAGCTTACAGTAAATAGAAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000206_00426915_00452327.mRNA True 2718 mRNA 0.45 16 426794 453106

Neighbor

gene id symbol gene type direction distance location
CI01000206_00385497_00393583 R3HDM1 coding upstream 33211 385497 ~ 393583 (+)
CI01000206_00220974_00253610 NA coding upstream 173184 220974 ~ 253610 (+)
CI01000206_00178241_00202393 NA coding upstream 223209 178145 ~ 203585 (+)
CI01000206_00029745_00051502 NA coding upstream 374873 29745 ~ 51921 (+)
CI01000206_00021515_00023628 NA coding upstream 403161 21515 ~ 23633 (+)
CI01000206_00475810_00481198 LCP1.S, LCP1 coding downstream 22704 475810 ~ 481222 (+)
CI01000206_00537962_00541275 NA coding downstream 84783 537889 ~ 542150 (+)
CI01000206_00571550_00572992 NA coding downstream 118444 571550 ~ 573289 (+)
CI01000206_00666815_00743152 SH3RF3 coding downstream 213709 666815 ~ 743152 (+)
CI01000206_00748542_00751311 NA coding downstream 295436 748542 ~ 751571 (+)
G389684 NA non-coding upstream 82590 343788 ~ 344204 (+)
G389672 NA non-coding upstream 99628 326961 ~ 327166 (+)
G389658 NA non-coding upstream 130833 295483 ~ 295961 (+)
G389642 NA non-coding upstream 267885 157555 ~ 158909 (+)
G389597 NA non-coding upstream 280586 142077 ~ 146208 (+)
G389728 NA non-coding downstream 52411 505517 ~ 505814 (+)
G389753 NA non-coding downstream 57823 510929 ~ 511157 (+)
G389759 NA non-coding downstream 73991 527097 ~ 527755 (+)
G389764 NA non-coding downstream 101955 555061 ~ 555276 (+)
G389729 NA non-coding downstream 139199 592305 ~ 592887 (+)
G389767 NA other downstream 108039 561145 ~ 565669 (+)
G389725 NA other downstream 126725 579831 ~ 583898 (+)
G389774 NA other downstream 153229 606335 ~ 608065 (+)

Expression


Co-expression Network