XLOC_012133 (si:ch211-214p16.2)


Basic Information

Item Value
gene id XLOC_012133
gene name si:ch211-214p16.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 25587625 ~ 25588430 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023915
ACACTCACCCTCGGTCCAGAACTGAACCTTACTGGAAGAACACAACACAGCATTAACCATGAATAAATTATGGATTTTGTGTTTCGTGGTGCTCATCATGAGCAAACCATTTTCAACTGAGGAGAGTCAGAAGTCAAGTGAAAACACTGTCCCATCGCCCAGCGCATCTACTAACTCCAGTGCTGTAGGACTGAGTCCTGTGCCCAAAACACTGTACCTTCTGTTCCCGGCTGCCACCCTGGGCTTCATCCACAGCAGATCCTGAACATTCACCAAAGGCGAGCATCAATGTGGGAGTGGCAGAATAGATAGTCATTGACAGACAGAGCACAAATCTGCAAGACAGAACACAGCACAGCACAGCTCAAAGGATTTTTAACTAATGAAAATAAGAACTCCTCCAAGAAGGATTGTCTGGTTACGCTCAGTGGCAACTTCTCTTGGAAGAGCCCCTTTCTTCTATTTGCTTCATGTGAATAAAGTTTAGCAGGGTAAACAACTCCACTACTTAAATCATGCGTTTGAAAGATTCTATTTCTCTAATGGCATTATGTGTATTAATGTAATTGACTGGCAAGTGTGTCTGTATGCATGATTAAACTGCTAAATGCC

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-030616-607 No description available

Ensembl:

ensembl_id ENSDARG00000094975

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023915 True 612 processed_transcript 0.43 2 25587625 25588430

Neighbor

gene id symbol gene type direction distance location
XLOC_012132 NA coding downstream 767 25585487 ~ 25586858 (-)
XLOC_012131 rtn4ip1 coding downstream 23778 25550235 ~ 25563847 (-)
XLOC_012130 NA coding downstream 64874 25512924 ~ 25522751 (-)
XLOC_012129 fam167b coding downstream 190067 25392524 ~ 25397558 (-)
XLOC_012128 lck coding downstream 205249 25344734 ~ 25382376 (-)
XLOC_012134 rab3gap2 coding upstream 21396 25609826 ~ 25630848 (-)
XLOC_012135 ppp1cb coding upstream 47523 25635953 ~ 25649079 (-)
XLOC_012136 si:ch211-214p16.3 coding upstream 61509 25649939 ~ 25737452 (-)
XLOC_012137 hhat coding upstream 188900 25777330 ~ 25831569 (-)
XLOC_012138 AL929023.1 coding upstream 232958 25821388 ~ 25847551 (-)
XLOC_012124 NA non-coding downstream 341015 25244438 ~ 25246610 (-)
XLOC_012123 NA non-coding downstream 390024 25188611 ~ 25197601 (-)
XLOC_012107 NA non-coding downstream 1269054 24307366 ~ 24318571 (-)
XLOC_012140 BX000364.3 non-coding upstream 275875 25864305 ~ 25864419 (-)
XLOC_012141 NA non-coding upstream 304992 25893422 ~ 25897784 (-)
XLOC_012142 NA non-coding upstream 365080 25953510 ~ 25955190 (-)
XLOC_012147 AL928908.2 non-coding upstream 1195496 26783926 ~ 26802736 (-)
XLOC_012151 NA non-coding upstream 1361982 26950412 ~ 26968341 (-)

Expression


Co-expression Network