CI01000208_00508002_00511190



Basic Information


Item Value
gene id CI01000208_00508002_00511190
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000208
NCBI id null
chromosome length 699623
location 507148 ~ 511257 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000208_00508002_00511190.mRNA
GTATAAAATGCCAGGTTTATTACAAGGAAGCTAGAGCAGAGGTGGAAAGAATAATATACATAATATTAAAAAAAAATGTTTTTTTAAGATAACAGAATTTATATTTTTAGTTGTAGAGTTCAGTGTACATACAGTGTCACTTGCGCTTGGATGTCAGTCAAAACCTTCTTAACTAATAAATTAAAAATATATAATTTTGCAAAAGAAAATTGCAGATGCATGGTGATATAGATGAAATATATTGTGAAATAAATGCATATTAAAGTATTTAATGAGTTTCTCAGTTCACCTGTGTTTCATCCTCTGTCAGCGGCCTCCTCCAGAAATGTTGAAATCTTTGGAGCTTCCCCTTTGTTGTAGAGGGGGTTTTCTGTCGCCCCTGAAATTACAGAACAATATTTATCAATATCTGTTTACCATTATAGAGATCAAAACGTGTTTGAAATAGTTTCAGCTAATTTTCGCGCTCCATGTAAGTGACGTCACCGATTAACGGTACAGCAAGCGCATACTTTTAGGTTAAATAAATAAATAAGTTTACTATCATCCATTGACAGTTTGCCAACAAAACTATCAAAACATCTCATCTACACATAAAGATGACATTAAAAGCCTAAACGTTCATTAAACAACATGAACCTCTTAAACGGTTGAGATGCTAACGGACTTTTTCAAAGACACTAAATCATTTCTTTGAAGTAAATATTCAACAGAAGTGTGTCAATTACACTTAAAAAAAAAGCGTCAGGAACAGTTTTATATATTATTTGTGTGATTTTATGGACTAAACTTACCTAAAATCAGTGAAAACAACAGCGAGATGAAGTTTTGCTGCTTGACGTCTCCCCGTTTCCATGGCAACTCAGATCCGCTCCAGTTTTTGCTATCTGGCTGGTGTGATTCTGGAGAGTCCTGTTCATCCTGTGACTGAAGGAGATACTCTGACTCTACGCTGTTTAGATAAGTTTACAAACCCATCAATCCTCAGAGCTGATTTCTATAAAGATGGATCACTCATCCAGAGTCAAACTACAGAGATGATCATCTCTACTGTCTCAAAGTCACATGAGGGTTTCTACTACTGCAAACACCCAGAGGAAGGAGAGTCGCCCAAGAGATGGATCTCAGTCAGAGTGTCTCATTCAGTCTCTCAGATCTCTGTCCTCAACATACTCGGTTCTGTACTGGCGGCTTGTCCATATCTGCTTGTGACAGTCGTGCTGATTTACAAATGCTGCAGAATAAGAGAATTCATAATATGTCCTGTGGTTCTGACTGGCGTGTGAAACTTTGCATACTAGTGTTCACATGAGAACTGCTAATTGTTTGACATTGTGATGGTTTTTAACGCTA

Function


NR:

description
leukocyte immune-type receptor TS32.15 L2.1a, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000208_00508002_00511190.mRNA True 1353 mRNA 0.37 4 507148 511257

Neighbor


gene id symbol gene type direction distance location
CI01000208_00479959_00498664 NA coding upstream 7677 479145 ~ 499471 (+)
CI01000208_00388124_00395613 DNAJA3, DNAJA3A coding upstream 111227 387628 ~ 395921 (+)
CI01000208_00314910_00326888 NA coding upstream 180243 313308 ~ 326962 (+)
CI01000208_00298383_00300398 VASNB coding upstream 206193 298054 ~ 300955 (+)
CI01000208_00269407_00286854 NA coding upstream 220117 269236 ~ 289336 (+)
CI01000208_00533761_00535474 NA coding downstream 22354 533611 ~ 535474 (+)
CI01000208_00554756_00555762 NA coding downstream 43312 554569 ~ 558695 (+)
CI01000208_00571370_00591616 CCNF coding downstream 60113 571370 ~ 592484 (+)
CI01000208_00611303_00616477 NA coding downstream 100046 611303 ~ 616800 (+)
CI01000208_00622771_00646633 ABCA3B, ABCA3 coding downstream 111514 622771 ~ 647166 (+)
G390631 NA non-coding upstream 4007 475836 ~ 503141 (+)
G390621 NA non-coding upstream 47730 458666 ~ 459418 (+)
G390634 NA non-coding upstream 49167 456197 ~ 457981 (+)
G390632 NA non-coding upstream 53993 439332 ~ 453155 (+)
G390729 NA non-coding downstream 37469 548726 ~ 549309 (+)
G390737 NA non-coding downstream 41403 552660 ~ 552867 (+)
G390749 NA non-coding downstream 160632 671889 ~ 672382 (+)
G390620 NA other downstream 148341 679966 ~ 680035 (+)

Expression



Co-expression Network