CI01000208_00674776_00677559


Basic Information

Item Value
gene id CI01000208_00674776_00677559
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000208
NCBI id null
chromosome length 699623
location 674722 ~ 678098 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU447202
TTGTGTACGGCAGCAGATTTGAATACACAGACCCTCGATTCACAGCAATGGTCGACAGGGCAAATGAAAATGTTCGTGTTGGTGGATCGGCTGCTATGATGATTTATGATATATTTCCGTGGTTGGGCCCATTCCTGAAAAACAAAAGGATTATTGTAGAAAATATTGTCCAAAGTCGAGTGGAGATGACGAAGTTGATCAAAGGGCTGCTGGAGACTCTGAATACACAGGACCGCAGAGGGTTTGTCGACTCCTTTCTCATCCGCAAACAGAGTGAAGAGAAATCTGGCAAGAAGGACACATACTTTCATGATGAGAATCTAATGATGACTGTGACAAATCTGTTTGTTGCTGGTACTGACACGACAGGAACGACTCTGCGCTGGGGTTTGATGCTCATGGCCAAATACCCTCATATACAGGATCGAGTTCAAGAGGAGATTGACCGAGTGATTGGTGGACGTCAGCCAGTGGTGGAAGACAGGAAGAAATTACCGTATACAGATGCTGTGATTCATGAAACTCAGAGACTGGCCAACATAGTGCCCTTGAGTCTGCCACATATAACTAGCTGTGACATTCACTTCAATGGATACTTCATCAAGAAGGGTACCACTGTCATTCCTCTGCTGACGTCCGTTTTGAAGGATCCAAGCGAATGGGAGAAACCGAACAGCTTTTACCCAGAACACTTCCTAGATGAGAAGGGCCAGTTTGTCAGGAGAGATGCTTTCATGCCCTTTTCTGCAGGTCGAAGGGTTTGTTTGGGAGAGAGTTTGGCCAGGATGGAGCTCTTCCTGTTCTTCACTTCCCTCCTTCAGAGCTACCGCTTCACAACTCCACCTGGAGTGTCTGGAGATGATCTGGATCTCAAAGGAATAGTCGGGGTCACGTTGAA
>TU447211
GGATCACACAAGGTTCCCTCCCATACATATCAGCTATAAATGTGAGTGCATCAGTTCAGAAGCTTAGAGAGAAAATGGCTGTAATCGAGTCACTTCTGCAGTTTCTCAGCACAGGTACATTACTGGGTGCTTTGCTGTTACTTCTGGTTTTGTATTTGCTTTCCTCCGGATCCAGATCTCAGAAAGAGGGGAAAGAGCCACCTGGACCCAAACCACTGCCTCTGCTGGGGAACCTGCTGACCCTTGACCTCAAGAGACCCTTTGACACCTTTTGTGAGCTGTCCAAAACCTACGGAAACATATTCCAAGTGTTTTTGGGTCCTAGAAAAACTGTGGTCTTAGTTGGGTACAAAACCGTCAAAGAAGCTCTTGTAAACTATGCAGAAGAGTTTGGCGACAGAAAAATTGGACCTGGTTTCAGGATAATGAACGACGAACATGGAATCCTTTTTTCCAATGGAGAGAACTGGAAAGAGATGAGACGCTTCGCTCTCAGCAACCTGTGGGACTTCGGGATGGGCAAGAGAGGAAGTGAAGAGAAAATCATAGAGGAAATTCAGCATCTGAAAGGAGGGTTTGATA
>TU447203
ATCTGTTACTCAGTTTCTTTGGAATGTGCATTTCTAGATTTATGATATATTTCCGTGGTTGGGCCCATTCCTGAAAAACAAAAGGATTATTGTAGAAAATATTGTCCAAAGTCGAGTGGAGATGACGAAGTTGATCAAAGGGCTGCTGGAGACTCTGAATACACAGGACCGCAGAGGGTTTGTCGACTCCTTTCTCATCCGCAAACAGAGTGAAGAGAAATCTGGCAAGAAGGACACATACTTTCATGATGAGAATCTAATGATGACTGTGACAAATCTGTTTGTTGCTGGTACTGACACGACAGGAACGACTCTGCGCTGGGGTTTGATGCTCATGGCCAAATACCCTCATATACAGGATCGAGTTCAAGAGGAGATTGACCGAGTGATTGGTGGACGTCAGCCAGTGGTGGAAGACAGGAAGAAATTACCGTATACAGATGCTGTGATTCATGAAACTCAGAGACTGGCCAACATAGTGCCCTTGAGTCTGCCACATATAACTAGCTGTGACATTCACTTCAATGGATACTTCATCAAGAAGGGTACCACTGTCATTCCTCTGCTGACGTCCGTTTTGAAGGATCCAAGCGAATGGGAGAAACCGAACAGCTTTTACCCAGAACACTTCCTAGATGAGAAGGGCCAGTTTGTCAGGAGAGATGCTTTCATGCCCTTTTCTGCAGGTCGAAGGGTTTGTTTGGGAGAGAGTTTGGCCAGGATGGAGCTCTTCCTGTTCTTCACTTCCCTCCTTCAGAGCTACCGCTTCACAACTCCACCTGGAGTGTCTGGAGATGATCTGGATCTCAAAGGAATAGTCGGGGTCACGTTGAA
>CI01000208_00674776_00677559.mRNA
ATATAAAAGCTTATGGTTGCATCTGGTAGATGCTTAGCAGTTAAGGATTGTAAAATGGCTGTAATCGAGTCACTTCTGCAGTTTCTCAGCGCAGGTACATTACTGGGCGCTTTGCTGTTGATTCTGGTTTTGTATTCGCTTTCCTCTGGATCCAGATCTCAGAAAGAAGGGAAAGAGCCACCGGGACCCAAACCACTGCCGCTGCTGGGGAACCTGCTGACCCTTGACCTCAAGAGACCCTTTGACGCCTTTTGTGAGCTGTCCAAAACATATGGAAATATGTTCCAAGTGTTTTATAGTCCTAAAAAAGTTTTGGTACTAGTTGGATACAAAACAGTTAAACAAGCACTTGTGAACTATGCAGAAGAGTTTAAGGACCGGGATATTATGCCTGGATTCTGGATAGTATCCAAAGGACATGTGTCTCAAAAAACAGTCACCGTCCTTATCCACATCTTGGCAGAAATAAGCAGAAAAATAAAGCAGTTTAGAGCTTTCAAAATGGTAGACACCAAACACAAAATTATGACCACAATTCATGGAATCCTTTTTTCCAATGGAGAGAACTGGAAAGAGATGAGACGCTTCGCTCTCAGCAACCTGTGGGACTTCGGGATGGGCAAGAGAGGAAGTGAAGAGAAAATCATAGAGGAAATTCAGCATCTGAAAGGAGGGTTTGATAAGTTTGAAGGATCCACTGAGAGACATTTGTTTGCTCTTCACAGGGAAAGCGAATGGGAGAAACCGAACAGCTTTTACCCAGAACACTTCCTAGATGAGAAAGGCCAGTTTGTCAAAAGAGATGCTTTCATGCCCTTTTCTGCAGGTCGAAGGGTTTGTTTGGGAGAGAGTTTGGCCAGGATGGAGCTCTTCCTGTTCTTCACTTCCCTCCTTCAGAGCTACCGCTTCACAACTCCACCTGGAGTGTCTGGAGATGATCTGGATCTCAAAGGAATAGTCGGGGTCACGTTGAATCCGTCCCCACACAAGCTGTGTGCAATCAGACGCTCCTGATCCAAGAAAATTTCATCAGTCCTTAGAAGAAAACACAGAAACAAATAATCTCTCCTTATCTAAATAAGAACTGGGATCGTTGTTGCACTAATTTTATGCATTGTGATCAAATGCACTTAATCGAAAATAAGAGCAAATAATTTAATGACTTCGCTGGTTGTTTTGCCATTTGCTATGAATTTTAAATGCCTCTTAAAATATTGAACTGAAATTGAATTTGACAGATGACCTGCTGTAAACTATACGATTGTTAATGCCCTGAATGAAAATCTGACTGAAGCATTATCAGCCGTTTATATATCTGAGTGTGTATACCATGGCATGTTTTGTTTACTGTAGATCAGTAGTTAGTCAGTTCTGTTACACTCAATTCAGTCTTGTTTGGATCTTAAGCTATTAATTCAGTACTTGCATGTATTGTCAGTTTATAATTTATTAAAATTTCTCATTCAAAATCATTCCAATTGGTCATATGTATTACAACCAGTAATCTATGAAACTTTACATGATTAGAGAACAAAAAGACCTGAAACTCACAA

Function

NR:

description
cytochrome P450 monooxygenase CYP2K1v2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU447202 True 148 TUCP 0.47 1 677372 677519
TU447211 False 141 TUCP 0.45 1 675917 676057
TU447203 True 148 TUCP 0.46 1 677372 677519
CI01000208_00674776_00677559.mRNA False 1553 mRNA 0.40 6 674722 678098

Neighbor

gene id symbol gene type direction distance location
CI01000208_00659672_00669637 CYP2K21, CYP2K19, CYP2K18 coding upstream 5067 659598 ~ 669655 (+)
CI01000208_00655853_00657320 NA coding upstream 17193 654013 ~ 657529 (+)
CI01000208_00622771_00646633 ABCA3B, ABCA3 coding upstream 27556 622771 ~ 647166 (+)
CI01000208_00611303_00616477 NA coding upstream 57922 611303 ~ 616800 (+)
CI01000208_00571370_00591616 CCNF coding upstream 82238 571370 ~ 592484 (+)
CI01000208_00679245_00685898 CYP2K16, CYP2K19 coding downstream 1147 679245 ~ 685908 (+)
CI01000208_00688872_00693800 CYP2K8 coding downstream 10774 688872 ~ 693800 (+)
G390749 NA non-coding upstream 2340 671889 ~ 672382 (+)
G390737 NA non-coding upstream 121855 552660 ~ 552867 (+)
G390729 NA non-coding upstream 125413 548726 ~ 549309 (+)
G390631 NA non-coding upstream 171581 475836 ~ 503141 (+)
CI01000208_00479959_00498664 NA non-coding upstream 189020 479145 ~ 499471 (+)
CI01000208_00554756_00555762 NA other upstream 116027 554569 ~ 558695 (+)

Expression


Co-expression Network