G390631


Basic Information

Item Value
gene id G390631
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000208
NCBI id null
chromosome length 699623
location 475836 ~ 503141 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU447223
TGCGTGAGTGCTTTTCCCAAAGCGCACGTGAGAATTTGAAATCAAAAGCAGCCTTCCGTCAGTGAATTTCATATTTTTATATATAAGCCCACATCATTCCAAACAACATAAATGATGCCTTCGTAGAGCATTTGGGTGAGACCACAAACACAAAGTGTAAACATCAAGCAAAGCACGCGTTTCTCACAACTCTCTCATACCCTGTGCAATGAATCCCGTGAATGTAATTTGCTTCAGCTTTTCCGAACTTCACGCTCAACTTCAAAGAAATTAATTGAAAACGCTCGCTCTGCTCTTGCCAGTGGACACGCACCAAAAGCACACGCAGCGTCATCACGCATCTGCGGTCAAATTTACAGTATTTAAATGTAAATAGGCCCAGCAGCTATTGAAGCCATAATATTTATTTTCAAGCCATGGATCAGGGAGCAGCAGTCATTGCTTTTCTCAAGGATGGCTCGAGCATCGGCCGGAGGTAACGTTCATAAGCAGCTGAAGACCATCGCCCCATGGCCTTCAATGTAGAGACAGGAGTGGAGGAAGCTGCGGTTGTAGCAGCACATGGCACAGCGAATGAAGGAAGCTCTGGGGAAGCTTGTAGCATTGCAGAGAGGGCGTAGATGGGAGGCAAACCAGGCCCTGGACATGGGCTTTCCCTCCTCCGTGGCAAATAATGTGTCCTGCTGACCAGCTTGTGGACGGCTCCTCAGGTAGCCCAACATAGATGACAGAGGATAAAAACAGAGTTAGATTCAGAGATACAAACGACTATTCCTTTCTTGTTCCTATCAGTTTTAGAGTGCTTTAGAAATATGAAGTGGTGCGAATAATTTGATAGGCTACATAAGAAATTGTGAGGTCATGTGACAGATTAAAAGAATTTGTGTGTGTGGAAAACTCGCCACCTCTGAGAAAACCATGAGCAAAAGGGAAAAGCCGATAATTGACTTGAGATTTCCCTCTTTAAAGCCCGAAACAAATAGATGGATTTTCTAGTACGCTGATGGTGGATGGATCCAGGCAGCGCAGGTGACCATACTTTTGGTTGAAGGCAGTGCAGCTATGGAGAAAGTGGCACAGAAGAACTGAAGTGAGACCAAGCAGTCATACATTTTTGTAAATGTAGATTTGGCTATAGATGACTACACATGTAGTGAGCTGCAAAGTGCAAATATATTGAAGGGTCATATCTAGTCTAGTACAGTCTGGGCATATACAATTTCATAACTATGTTTTCATGTTAACACTGTTTTGACACAATCTGTATGGTAAAACATCGGAAGTCTGAATAAATATTAAACCTTATGTTCTGTTAAACAAACAAAAATAAATGCATTTTCCTTTTACGCGCGGCTCGCGAAGCGCCAATTTTCAAAATTTTAAACCAGCTGTCCTGATCTTCCGATACTGCATGACGTTCGAAGCTTCAAAACGTCAATCAATCACGTATTGACAGCGTGTGATCAAAGTCCCTATATCTATAGTCTTTGGTGTGATACAATGTGCTTTGAAAACTGCGTCAGAGCTTCGGAGTCCCGGTATAACCATACCATCACTACGGTCCATATGCAATGAATCTTCTGTTTTAAAGCAAAAACACCACGTTTGAGCAGCAGTGACTGTGACTGATATAGTGAACACCTGATGACCGCAAACGAAACACCCTCCAGAGCCAAAGAACCAGTAAAAACGTTTGCCAAAATGAAATGATTACAGTAGGCCCGGATTAACAGTGTAGCGCCCTAGGGTGACCACATTTGAAGTGCCTTCACGTGCTATTGGAATTATCGTAAATACGAGCTTCATAGGTAAAAAAAAAAGCACATGAACATTTACATATATGTATCATTTGAAGCGTAGCCTATTTTATGTTTCATTCAGCGGAAATTACAGAATCGTCAGCCACCGGACTACCTAGATAGCACTGTAAATGTTTATGGTTGTCAGTGCATGGGACACTACACAGGCCTATAATTTTGTCTATAGGCCTAAGATTTTCCCAATAAATAGGCAAGAATAAACCTGGTGTCCTCCATGCAGTGGCATGCCCAGACCTCTGCGAGGACAGGGGCGAAATCGCGTTCCGGGGGAGGAGAAATGGGAACTCGGGGGCACCGCGATGCGACCGCAAAGGGCACTTTCACTTTCACGATCAAAGCAATAGTATCCAGCTGCAGACCCGCAGCACCATCAGTTTCAGAACCGCAGTCACAGAACGGAAGTGAGAGACCGATGCAGTCCGCTCTACAATATTTAACAACAATACTTTTAAACGAAGTCACTTTTCTGTGACCCCCCTATTGGCTGGTGCCCCAGGGCACTCGCCCAATCCCGTCTATGGATAATCCGGCCCTGGATTACAGCATCAACTGTGCTCTTGTTGAGAAAAGCCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU447223 True 2394 lncRNA 0.44 2 475836 503141

Neighbor

gene id symbol gene type direction distance location
CI01000208_00388124_00395613 DNAJA3, DNAJA3A coding upstream 79915 387628 ~ 395921 (+)
CI01000208_00314910_00326888 NA coding upstream 148931 313308 ~ 326962 (+)
CI01000208_00298383_00300398 VASNB coding upstream 174881 298054 ~ 300955 (+)
CI01000208_00269407_00286854 NA coding upstream 188805 269236 ~ 289336 (+)
CI01000208_00249095_00260113 NA coding upstream 215367 248618 ~ 260469 (+)
CI01000208_00508002_00511190 NA coding downstream 4007 507148 ~ 511257 (+)
CI01000208_00533761_00535474 NA coding downstream 30470 533611 ~ 535474 (+)
CI01000208_00554756_00555762 NA coding downstream 51428 554569 ~ 558695 (+)
CI01000208_00571370_00591616 CCNF coding downstream 68229 571370 ~ 592484 (+)
CI01000208_00611303_00616477 NA coding downstream 108162 611303 ~ 616800 (+)
G390621 NA non-coding upstream 16418 458666 ~ 459418 (+)
G390634 NA non-coding upstream 17855 456197 ~ 457981 (+)
G390632 NA non-coding upstream 22681 439332 ~ 453155 (+)
G390628 NA non-coding upstream 56055 416406 ~ 419781 (+)
G390676 NA non-coding upstream 144904 330663 ~ 330932 (+)
G390729 NA non-coding downstream 45585 548726 ~ 549309 (+)
G390737 NA non-coding downstream 49519 552660 ~ 552867 (+)
G390749 NA non-coding downstream 168748 671889 ~ 672382 (+)
G390620 NA other downstream 156457 679966 ~ 680035 (+)

Expression


Co-expression Network