XLOC_012166 (BX465838.2)


Basic Information

Item Value
gene id XLOC_012166
gene name BX465838.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 28643458 ~ 28652512 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00023980
AGAGTAAAATAAGCTGAGATAAGTGATGTGCTGTGCTGTGCAGTGTGGGTGATGCTGACTCACCCAGCTGTGTGTTGTCTCTGCGGGGAAGCTCTTTAACCAGAGCCACTGCGTGTTCCGATACCTCCACTGCCTCTCTCTGAGCCAGCTGTCTTAAACAGGCCACAACCGCTCGCCGCAGAGACAGATCCGGCCCCACAGAGGTGATGAGGGCGTTAAGACAGCGGCCCAGGCTTTGCTGCacctccatgtgtgtgtgtggggtagAGAGGAGCAAACGCAGCACCAGAGTGAAGCTGGCCTCCAGGTGACTGTGGTACAAAGGACCTGCTAGGTCCACCACAGTGGACAGAGCATGAAGAGCCCACATCTGCACACAAAGTTCACTGAAagattaatgcattaaaaaaaaaaaaaaaaactgcaatctgCGTCAAAACATTCTCTGTTCATTCTAGATTCAAGCATAAGTTGCTCGTTCACACTGAAATGtcagaaaataataaaacttagttaatatac

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093993

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00023980 True 522 lncRNA 0.48 2 28643458 28652512

Neighbor

gene id symbol gene type direction distance location
XLOC_012165 BX465838.1 coding downstream 19282 28624048 ~ 28624176 (-)
XLOC_012164 im:7136021 coding downstream 30607 28607417 ~ 28612851 (-)
XLOC_012163 BX465838.4 coding downstream 112876 28530467 ~ 28530582 (-)
XLOC_012162 htr1d coding downstream 445359 28166859 ~ 28198099 (-)
XLOC_012161 kdm1a coding downstream 541469 28082441 ~ 28101989 (-)
XLOC_012167 ap4s1 coding upstream 51459 28703971 ~ 28707970 (-)
XLOC_012168 coch coding upstream 91149 28743661 ~ 28749640 (-)
XLOC_012169 opn6b coding upstream 108074 28760586 ~ 28770800 (-)
XLOC_012170 scfd1 coding upstream 118516 28771028 ~ 28797395 (-)
XLOC_012171 g2e3 coding upstream 146213 28798725 ~ 28811747 (-)
XLOC_012158 NA non-coding downstream 1239707 27402643 ~ 27403751 (-)
XLOC_012152 AL928908.3 non-coding downstream 1657699 26982035 ~ 26985759 (-)
XLOC_012151 NA non-coding downstream 1675117 26950412 ~ 26968341 (-)
XLOC_012172 NA non-coding upstream 269060 28921572 ~ 29022679 (-)
XLOC_012176 NA non-coding upstream 563554 29216066 ~ 29224911 (-)
XLOC_012179 AL845481.1 non-coding upstream 620451 29272963 ~ 29273081 (-)
XLOC_012182 AL928842.1 non-coding upstream 984693 29637205 ~ 29637321 (-)
XLOC_012183 CT027582.2 non-coding upstream 1069573 29722085 ~ 29723213 (-)

Expression


Co-expression Network