XLOC_012185 (CR377229.1)



Basic Information


Item Value
gene id XLOC_012185
gene name CR377229.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007128.7
NCBI id CM002901.2
chromosome length 53461100
location 29976009 ~ 30054157 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00024009
AGAATGAAAACGTCCCGTTAGAGGCAGTGGACGCCGCAGCTGATTGGACAGGAGTTTAAAAAGCaggcactgtcactttaagaagcAGTTCTTACCTGGACAGCCGCCACAGAAGGTAACCTACGCTTTATATCTTCAGCACGACTACATTCATGTACATATAGCTTTTAATCACCCACTTTTGCTTCAAAATAACCTTAGGCTGCTGTCAAAAAGGCTTTTCAGCCCCTGTCAACTATCTGTCAGTGTATGGAAAAGAACAGCATGAACATGCCTCAGAAGGTCTACTTTTGTCTCGTACAGTTTTGCGGTGACATCAGGAAGTGGCTGGTTCAATATTATGGCATCCCTGGTGACATGAGTAGAGGAGCTATTATGACTGATGCTCCAGAGGAAGGGGAGGAAAAAGCCAACGGTGTGGTTTGGGTTCTTCGCTGAGAGCTCTGGAAACCCGACCCTCACCGTCCAACCGGAACAGGAGGAGGGATGATCAGGGGACTTGTTGCAATCGCTCAACCCTATTCCCAACCGCACACACCAACACACTCCTTCTGTCATGCCCACCTTCTtcctttcttcttcttttcctttttttgtccTGTATGGAAATACGTGCCTGCCATTATTGGTGTATTTCTTTAGACGTGTCAGGAATTCGAGGCTTGGGG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117622

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00024009 True 668 lncRNA 0.47 3 29976009 30054157

Neighbor


gene id symbol gene type direction distance location
XLOC_012184 esrrga coding downstream 73822 29797876 ~ 29902187 (-)
XLOC_012181 ush2a coding downstream 204370 29376854 ~ 29771639 (-)
XLOC_012183 CT027582.2 coding downstream 252796 29722085 ~ 29723213 (-)
XLOC_012182 AL928842.1 coding downstream 338688 29637205 ~ 29637321 (-)
XLOC_012180 tecpr2 coding downstream 663503 29282863 ~ 29312506 (-)
XLOC_012186 NA coding upstream 23174 30077331 ~ 30082713 (-)
XLOC_012187 si:dkey-27l15.1 coding upstream 85942 30140099 ~ 30225524 (-)
XLOC_012188 NA coding upstream 223974 30278131 ~ 30280713 (-)
XLOC_012189 NA coding upstream 252058 30306215 ~ 30369525 (-)
XLOC_012190 NA coding upstream 344792 30398949 ~ 30409759 (-)
XLOC_012179 AL845481.1 non-coding downstream 702928 29272963 ~ 29273081 (-)
XLOC_012176 NA non-coding downstream 751098 29216066 ~ 29224911 (-)
XLOC_012172 NA non-coding downstream 953330 28921572 ~ 29022679 (-)
XLOC_012193 NA non-coding upstream 519415 30573572 ~ 30593058 (-)

Expression



Co-expression Network